DC900089

Overview
NameDC900089
Unique NameDC900089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:504..1401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.750e-60
Identity = 114/225 (50.67%), Postives = 158/225 (70.22%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677
            ++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A +  A F++VV S  + KY+GE  R++R++F  A+++ P IIF+DEIDAI  +RF   T ADRE+QR L+ELLNQ+DGFDQ   VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + +  I     + +    E+D E  V   +  +GAD+ ++C   GM A+R     V+ +DF KA +
Sbjct:  180 AVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYK 404          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.650e-58
Identity = 111/240 (46.25%), Postives = 160/240 (66.67%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 719
            ++ELPL   +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++  ANF++VV S  + KY+GE  R++R++F  AR++ P IIF+DEIDAI  +RF   T ADRE+QR L+ELL Q+DGFDQ   VK+IMATNR D LDPALLRPGRLDRKIE P   + + R  + +   A +    E+D +  +   +  +GA +  +  +AG+ A+R  R  ++  D  +A  +  +   +E  A Y
Sbjct:  149 AVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFY 388          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.035e-57
Identity = 114/240 (47.50%), Postives = 164/240 (68.33%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI-----HEDFMKAVRKLNEAKKLE 704
            ++ELPL   +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++  A+F++V  S  + KY+GE  R++R++F  AR++ P IIF+DEIDAI  +RF   T ADRE+QR L+ELLNQ+DGF+Q   VK+IMATNR D LDPALLRPGRLDRKIE P L + + R  I    A+ ++   E+D ++++   E  +GA +  +  EAG+ A+R  R  +I      + +   V+   EA +LE
Sbjct:  181 AVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDAYAAQVKTGQEADRLE 420          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.932e-55
Identity = 110/233 (47.21%), Postives = 158/233 (67.81%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR-AERDYVIHEDFMKAVRKLNEAKK 698
            ++E PL  PE+F    IKPP+G+LL+GPPGTGKTLLA+A+A+  +ANF+ V    ++ K++GES + +REMF  AR   PC+IF DEID++  RR   G S     +R + +LL +LDG ++L  V +I ATNRPD++DPALLRPGRL+R I IP P++++R+EI KIH  G     +++ E + +  EG++GAD+  VC EAGM AIR   +  +  E+  +A +KL   KK
Sbjct:  470 AVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDS--HVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKK 700          

HSP 2 Score: 211.46 bits (537), Expect = 5.453e-54
Identity = 114/250 (45.60%), Postives = 162/250 (64.80%), Query Frame = 3
Query:    6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR-----------------AERDYVIHEDFMKAVRKLNEAKKLE 704
            IELPL +PELF R+GI+PPKGVLLYGPPGTGKTL+A+A+A+ +DA+F+ +    I+ KY GES + +RE+F  A+++ P IIF+DEID+I  +R  E  + + E +R + +LL  +DG +  G V +I ATNRPD +DPAL RPGR DR+IEI +P+++ R EIL+IH   +    ++D E + +L  GF GADL  +C EA M A+R                  E   V  EDFM+A++ +  +   E
Sbjct:  198 IELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR--EEVTGEVE-RRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPSAMRE 444          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.442e-55
Identity = 106/224 (47.32%), Postives = 156/224 (69.64%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 671
            ++ELPL+  +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++  A F++V  S  + KY+GE  R++R++F  AR++ P IIF+DE+D+I  +RF   T +DRE+QR L+ELL Q+DGFDQ   VK+IMATNR D LDPALLRPGRLDRKIE P L + + R  I    A+ ++   E D ++++   +  +GA +  +  EAG+ A+R  R  ++  D  +A
Sbjct:  187 AVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.414e-55
Identity = 105/209 (50.24%), Postives = 146/209 (69.86%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629
            +I LP+ + E F  +GI+PPKGVL+YGPPGTGKTLLARA A+   A FLK+    ++  +IG+ A+L+R+ F  A++  P IIF+DE+DAIG +RF    + DRE+QRT++ELLNQLDGF    +VK+I ATNR D+LDPALLR GRLDRKIE P+PNE++R  I++IH+  +    +++YE + +          +    EAGM A+R
Sbjct:  185 AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.617e-53
Identity = 102/209 (48.80%), Postives = 147/209 (70.33%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629
            ++E PL   E+F ++G++PPKGVLL+GPPGTGKTLLA+A+A+   ANF+ V    I  K++GES + IRE+F  AR   PCIIF DEIDAI  +R  + +SA  +  + + +LL +LDG ++   V +I ATNRPD++DPALLRPGRLDR I +P+P+E++R++I KIH   +    +++ E + K  EG+ GAD+  +C EA M A+R
Sbjct:  467 AVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTD--KVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVR 673          

HSP 2 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 101/209 (48.33%), Postives = 141/209 (67.46%), Query Frame = 3
Query:    6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629
            IELP+ +PELF ++GI+PPKGVLL GPPGTGKTLLA+A+A+   ANF  +    I+ KY+GE+   +R++F  A ++ P IIF+DEIDAI  +R      A  E++R L+ +LL  +DG    G+V +I ATNRP+ LDPAL RPGR DR+I I +P+ + R EIL+IH   +    ++D + +  +  GF GADL  +C EA M A+R
Sbjct:  195 IELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKR----DEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALR 399          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.030e-53
Identity = 103/230 (44.78%), Postives = 158/230 (68.70%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD--YVIHEDFMKAVRKL 683
            ++ELPL+ P++F R+GI+P KG LLYGPPG GKTLLA+A+A+  +ANF+ +    ++ K++GES + IRE+F  A+   P I+F+DEID+I  RR   GT++D  + +R + +LL  LDG + +  V +I ATNRPD++DPALLR GR D+ I IP P++++R+ ILK+H   +    ++D   + +  EG+ GADL N+C EAGM+A R   D   V  ++F+ A++ +
Sbjct:  482 TVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR---GTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708          

HSP 2 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 107/254 (42.13%), Postives = 149/254 (58.66%), Query Frame = 3
Query:    6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA----AGIAKHGEIDY-EAVVKLAEGFNGADLRNVCTEAGMSAIR----------------AERDYVIHEDFMKAVRKLNEAKKLE 704
            IELPL +PELF R+GI PPKGV+LYGPPGTGKTL+ARA+A+   ANFL +    I+ KY G+S + +RE+F  A +  P IIF+DEID+I  +R       +R   R + +LL  +DG  + G V +I ATNR D +DPAL RPGR DR+IEI +P+   R EIL IH      G+++  +  + E +     GF GADL  +  E+ M+A+R                 E+  V  +DF  A++ +  +   E
Sbjct:  206 IELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVER---RVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLRE 456          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 6.240e-50
Identity = 101/211 (47.87%), Postives = 143/211 (67.77%), Query Frame = 3
Query:    3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA 632
            ++E PL  PELF + G+ PPKG+LL+GPPGTGKT+LA+A+A+   ANF+ V    I+ K++GES + IRE+F  AR   P +IF DEID+I   R   G S D  + +R + +LL ++DG   L KV +I ATNRPD+LDPALLRPGR DR I +P P++ +R EILK+H   +    ++  E + + AEG+ GADL  +  EA ++A+R+
Sbjct:  502 AVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIR---GLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRS 709          

HSP 2 Score: 190.274 bits (482), Expect = 1.301e-47
Identity = 99/208 (47.60%), Postives = 141/208 (67.79%), Query Frame = 3
Query:    6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629
            +E P+ +PELF R+GI PPKG+LLYGPPGTGKTLLARA+A+ I A F+ V    I+ K+ GES + IRE+F  A ++ P IIF+DEIDAI  +R  E  + + E +R + +LL  +DG    G+V +I ATNRPD +DPAL RPGR DR+IEI  P+ + R +IL++H   +    ++D + + ++  G+ GADL  +  EA + A+R
Sbjct:  228 VEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR--EDVTGEVE-KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALR 432          
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 100/223 (44.84%), Postives = 142/223 (63.68%), Query Frame = 3
Query:   18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADR-EIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683
            L +P  F ++G +PPKGVLLYG PG GKTLLA+AIA      F+ V  S  ++ ++G  A  +R++F  A+ H PCIIF+DEIDA+G  R +        E ++TL +LL ++DGFD    + +I ATNRPD+LDPALLRPGR DR+I IP P+ + R EILK+HA       ++D E V +   GF GADL N+  EA + A R  ++ +  E+  +A+ ++
Sbjct:  174 LKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRI 396          
The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 389
Match NameE-valueIdentityDescription
PRS6B_MOUSE1.750e-6050.6726S protease regulatory subunit 6B OS=Mus musculus... [more]
PRS6B_SCHPO3.650e-5846.2526S protease regulatory subunit 6B homolog OS=Schi... [more]
PRS6B_ASPNG4.035e-5747.5026S protease regulatory subunit 6B homolog OS=Aspe... [more]
Y1297_ARCFU4.932e-5547.21Cell division cycle protein 48 homolog AF_1297 OS=... [more]
PRS6B_YEAST6.442e-5547.3226S protease regulatory subunit 6B homolog OS=Sacc... [more]
PR6AA_XENLA8.414e-5550.2426S protease regulatory subunit 6A-A OS=Xenopus la... [more]
Y1156_METJA4.617e-5348.80Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
VAT_THEAC6.030e-5344.78VCP-like ATPase OS=Thermoplasma acidophilum GN=vat... [more]
SAV_SULAC6.240e-5047.87Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
FTSH_AQUAE1.537e-4844.84Cell division protease ftsH homolog OS=Aquifex aeo... [more]

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Properties
Property NameValue
Genbank descriptionDC900089 VSS Citrus sinensis cDNA clone VS27V05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bp
AATCTATTGAGCTACCTTTGATGAATCCTGAGCTTTTCCTTAGAGTTGGA
ATTAAACCTCCCAAGGGCGTTCTTCTTTATGGGCCTCCTGGAACTGGCAA
GACATTATTAGCACGAGCAATTGCCAGTAACATAGATGCAAATTTTCTGA
AGGTTGTTTCAAGTGCCATTATTGATAAGTACATTGGGGAAAGTGCAAGG
TTGATAAGAGAGATGTTTGGATACGCACGCGATCATCAACCCTGCATCAT
TTTTATGGATGAAATTGATGCCATCGGTGGGCGCCGTTTTAGTGAAGGAA
CCAGTGCAGATCGTGAAATTCAAAGGACACTGATGGAGTTACTTAATCAG
CTTGATGGATTTGATCAGCTTGGGAAGGTTAAAATGATAATGGCCACTAA
CAGACCTGATGTCCTTGACCCTGCACTTCTTCGTCCAGGGCGACTGGATA
GGAAAATTGAGATTCCATTGCCAAATGAGCAGTCAAGAATGGAAATTCTT
AAAATTCATGCTGCTGGCATTGCTAAGCATGGCGAGATTGATTATGAGGC
TGTTGTGAAGCTTGCAGAGGGCTTTAATGGGGCTGATCTCCGAAATGTTT
GCACCGAGGCTGGAATGTCGGCAATCCGTGCTGAACGTGATTATGTCATC
CACGAAGATTTTATGAAGGCTGTCCGGAAACTGAATGAGGCAAAGAAACT
TGAATCAAGTGCTCACTACAATGCTGATTTTGGAAAAGAGTAAAAACATT
TAGGAAAAGAGCCAAGGATCTTGAGGCAGTGCGGTTATTTTTCAGATGTA
ATTGTTTTCATATTTTTGTTAAAACATCTTGCTTTAATTTGTGAAGTTAG
TGGTTCTTTGAGCGATGGAATGCTNTATATATTAAACAATCATTCACGT
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