DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.634e-32 Identity = 87/263 (33.08%), Postives = 150/263 (57.03%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK + K G + + + ++ G++G+DL + +A + IR +E + DF ++++K+ + + LE+ +N DFG Sbjct: 358 LPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFTKRVYVSLPNEETRLLLLK---NLLCKQGSPLTQKELAQLARMTNGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 610
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.634e-32 Identity = 85/228 (37.28%), Postives = 122/228 (53.51%), Query Frame = 3 Query: 24 NPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG---------FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRK 680 NP + + +GVLL GPPGTGKTL AR +A F+ + D +A+ I EMF AR + P +F+DEIDAI GR + D + T L+ QLDG F V I ATNRPD LD +R GR+DR++ I LP+ + R++I +H+AG +ID+ +V GF+GAD+RN+ EA + ++R R Y+ +D + + K Sbjct: 514 NPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAK-INEMFSIARRNAPAFVFVDEIDAIAGRHARK----DPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDK 736
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.492e-32 Identity = 88/264 (33.33%), Postives = 146/264 (55.30%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEAVVKLA---EGFNGADLRNVCTEAGMSAIR------------------AERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G + ++ ++ ATNRP LD A LR R +++ + LP Q+R +L + + K G +D EA+ +LA +G++G+DL + +A + IR E+D+ + +K +R+ + L S ++ D+G Sbjct: 512 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPGVQTRELLL---SRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDF---HNSLKRIRRSVAPQSLNSYEKWSQDYG 765
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.492e-32 Identity = 87/263 (33.08%), Postives = 152/263 (57.79%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR-----AERDYVIHE-------DFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A +A F + ++ + KY+GE +L+R +F AR+ QP IIF+DEID++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R ++I + LP E++R+++LK ++KH + + + +L +G++G+DL ++ +A + IR R+ HE DF+++++++ + + L+ +N ++G Sbjct: 313 LPALRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLK---TEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLR--RFAKRIYVALPTEETRLKLLK---NLLSKHRNPLSQKELSQLARLTDGYSGSDLTSLAKDAALGPIRELKPEQVRNMSAHEMRDIRISDFLESLKRIKRSVSPQTLDQYVRWNREYG 565
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.867e-32 Identity = 87/261 (33.33%), Postives = 146/261 (55.94%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIRA------------ERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D +A + K+ +G++G+DL + +A + IR ++ +DF +K +R+ + L S +++D+G Sbjct: 531 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDINAMRHITEKDFHNSLKRIRRSVAQQSLSSYEKWSSDYG 784
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.867e-32 Identity = 88/264 (33.33%), Postives = 146/264 (55.30%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEAVVKLA---EGFNGADLRNVCTEAGMSAIR------------------AERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G + ++ ++ ATNRP LD A LR R +++ + LP Q+R +L + + K G +D EA+ +LA +G++G+DL + +A + IR E+D+ + +K +R+ + L S ++ D+G Sbjct: 508 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLL---SRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDF---HNSLKRIRRSVAPQSLNSYEKWSQDYG 761
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.867e-32 Identity = 75/216 (34.72%), Postives = 133/216 (61.57%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK------IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ P+ P+LF + + P KG+LLYGPPGTGKTLLA+A+A+ + F + +S I+ K+ G+S +L+R +F AR H P IF+DE++++ +R + +R ELL Q+DG + + ++ A+N P LD A+LR RL+++I + LP++++R +++ +++G+ ++DY + +G++G+D+R VC EA M +R Sbjct: 273 AVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTGPGGEHEGSRRMKTELLVQMDGLARSDDLVFVLAASNLPWELDYAMLR--RLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRPVR 485
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31 Identity = 88/261 (33.72%), Postives = 144/261 (55.17%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D EA + K+ +G++G+DL +A + IR + + +DF +K +R+ + L S ++ D+G Sbjct: 501 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTEALRRLAKITDGYSGSDLTARPKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWSQDYG 754
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31 Identity = 87/261 (33.33%), Postives = 144/261 (55.17%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+ Q+R +L + K G +D +A + K+ EG++G+DL + +A + IR + + +DF +K +R+ + L S ++ D+G Sbjct: 525 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDVQTRELLLN---RLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRQITEKDFHNSLKRIRRSVAPQSLNSYEKWSQDYG 778
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.707e-31 Identity = 76/216 (35.19%), Postives = 129/216 (59.72%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAK------HGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ P+ P+LF + + P KG+LLYGPPGTGKTLLA+A+A+ F + +S I+ K+ G+S +L+R +F AR H P IF+DE++++ +R + R ELL Q+DG + + ++ A+N P LD A+LR RL+++I + LP+ ++R ++ ++K H E++Y + + EG++G+D++ VC EA M +R Sbjct: 269 AVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVR 481 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |