DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.107e-30 Identity = 86/245 (35.10%), Postives = 137/245 (55.92%), Query Frame = 3 Query: 27 PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPC--------IIFMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAH 716 P + R+GIK KG+LL+GPPGTGKTL+AR I ++ K+V+ ++ K++GE+ + +R++F A Q +I DEIDAI R S +GT I + +LL ++DG + L V +I TNR D+LD ALLRPGRL+ ++EI LP+E R++IL+IH + ++ +I+ + + + ++GA+L V A A+ + + +D K V + N +E H Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQ---LSMDDLTKPVEEENIKITMEDFLH 477
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30 Identity = 76/216 (35.19%), Postives = 125/216 (57.87%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA-IIDKYIGESARLIREMFGYAR--------DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 626 ++ PEL ++ K KG+LLYGPPGTGKTL+AR ++ ++ K+V+ ++ KY+G S IR +F A D +I DE+D++ +R S + + +LL+++DG DQL + +I TNR D++D ALLRPGR + +IEI LP+E+ R +I IH + ++G +++++ + L + F GA++ +C A AI Sbjct: 296 ILPPELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAI 511
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30 Identity = 82/204 (40.20%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI-------------DAN--FLKVVSSAIIDKYIGESARLIREMFGYARDH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI--------LKIHAAGIAKHG 533 ++ELP ++ +LF ++PPKGVLLYGPPG GKTL+A+A+A+++ DA FL + +++K++GE+ R IR +F AR+ P I+F DE+D+I R S G S+D E + +LL+++DG + L V +I A+NR D++DPA+LRPGRLD KI+I P+ +S +I L I+A +A+ G Sbjct: 249 AVELPFLHKDLFHEYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTRGS-GVSSDVE-TTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDIFSKYLVDGLPINADDLAEFG 450
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.465e-30 Identity = 74/185 (40.00%), Postives = 119/185 (64.32%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI----------DAN-----FLKVVSSAIIDKYIGESARLIREMFGYARDH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI 497 ++ELP ++ EL+ ++PPKGVLLYGPPG GKTL+A+A+A+++ DA FL + +++K++GE+ R IR +F AR+ P I+F DE+D+I R GT +++ T++ +LL+++DG + L V +I A+NR D++DPA+LRPGRLD KI+I P+ ++ +I Sbjct: 267 AVELPFLHKELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDI 448
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.172e-30 Identity = 84/263 (31.94%), Postives = 148/263 (56.27%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIK-PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM--ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM----EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH------------EDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP PELF G++ PPKG+LL+GPPG GKT+LA+A+A ++ FL + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG + ++++ ATNRP LD A LR R +++ + LP+ +R+ ++LK H ++ ++ Y + +L EG++G+DL + +A + IR + +DF+ +++K+ + + L+ +N +FG Sbjct: 392 LPTDRPELF--TGLRAPPKGLLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLSERKDNEHEATRRLK---TEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALR--RFTKRVYVTLPDHNTRVILLEKLLKKHNNPLSA-DKLKY--LARLTEGYSGSDLTALAKDAALGPIRELNPEQVRCVDPKKMRNISLQDFLDSLKKVRRSVTPQSLDFFDRWNREFG 644
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 7.172e-30 Identity = 83/218 (38.07%), Postives = 125/218 (57.34%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEI------DYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP +NP LF + +P KG+LL+GPPG GKTLLA+A+A F + +S++ K++G+S + IR +F AR+ QP IIF+DEID+I E + D E+ R + E L Q DG ++ +I ATNRP LD A+LR R ++I + LP+E++R E++ + KH + D + GF+ +DL +C EA M IR Sbjct: 254 AVILPALNPNLFKGLR-QPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSI----LCERSEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELI---TKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPIR 461
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.072e-29 Identity = 78/213 (36.62%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNID-ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P LF G + P +G+LL+GPPGTGK+ LA+A+A+ + + F + SS ++ K++GES +L++ +F AR+++P IIF+DEID++ G R + A R I+ + + + G D G + ++ ATN P VLD A+ R R +++I IPLP +R + K+H G ++ E D+ + K EG++GAD+ + +A M +R Sbjct: 149 AVILPIKFPHLF--TGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGV-GVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFKLH-LGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPVR 354
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.930e-29 Identity = 77/214 (35.98%), Postives = 129/214 (60.28%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNID-ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P LF G + P +G+LL+GPPGTGK+ LA+A+A+ + + F V SS ++ K++GES +L++ +F AR H+P IIF+DE+D++ G R + A R I+ E L Q+ G +++ ATN P VLD A+ R R +++I IPLP E +R ++ ++H G H + + + + EG++GAD+ + ++ M +R Sbjct: 142 AVILPIKFPHLF--TGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLH-LGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVR 347
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.930e-29 Identity = 77/214 (35.98%), Postives = 129/214 (60.28%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNID-ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P LF G + P +G+LL+GPPGTGK+ LA+A+A+ + + F V SS ++ K++GES +L++ +F AR H+P IIF+DE+D++ G R + A R I+ E L Q+ G +++ ATN P VLD A+ R R +++I IPLP E +R ++ ++H G H + + + + EG++GAD+ + ++ M +R Sbjct: 142 AVILPIKFPHLF--TGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLH-LGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVR 347
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.930e-29 Identity = 77/214 (35.98%), Postives = 129/214 (60.28%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNID-ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P LF G + P +G+LL+GPPGTGK+ LA+A+A+ + + F V SS ++ K++GES +L++ +F AR H+P IIF+DE+D++ G R + A R I+ E L Q+ G +++ ATN P VLD A+ R R +++I IPLP E +R ++ ++H G H + + + + EG++GAD+ + ++ M +R Sbjct: 142 AVILPIKFPHLF--TGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLH-LGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVR 347 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |