DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 6.713e-28 Identity = 75/213 (35.21%), Postives = 119/213 (55.87%), Query Frame = 3 Query: 27 PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPC--------IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 626 P + ++GI KG+LLYGPPGTGKTL+AR I + ++A K+V+ I+ KY+G S IR +F A II DE+D++ +R S G + +LL ++DG DQL + +I TNR D++D ALLRPGR + ++EI LP+E+ R++I I + ++ +++ + L + F+GA++ + A AI Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGVG-DNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAI 474
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.713e-28 Identity = 83/245 (33.88%), Postives = 128/245 (52.24%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGI-KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------AERDY-------VIHEDFMKAVRKLNEAK 695 ++ LP+ LF + +PPKGVLLYGPPG GKTL+A+A A F+ + S + DK+ GES +L +F A QP IIF+DEID+ R S A ++ M L + LD D +V ++ ATNRP LD A++R R+ + I P + R ILK+ +D V + +GF+G+DL+ +C +A + +R +E + V +D +A+ K+ ++K Sbjct: 106 TVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.713e-28 Identity = 83/245 (33.88%), Postives = 128/245 (52.24%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGI-KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------AERDY-------VIHEDFMKAVRKLNEAK 695 ++ LP+ LF + +PPKGVLLYGPPG GKTL+A+A A F+ + S + DK+ GES +L +F A QP IIF+DEID+ R S A ++ M L + LD D +V ++ ATNRP LD A++R R+ + I P + R ILK+ +D V + +GF+G+DL+ +C +A + +R +E + V +D +A+ K+ ++K Sbjct: 106 TVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.713e-28 Identity = 83/245 (33.88%), Postives = 128/245 (52.24%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGI-KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------AERDY-------VIHEDFMKAVRKLNEAK 695 ++ LP+ LF + +PPKGVLLYGPPG GKTL+A+A A F+ + S + DK+ GES +L +F A QP IIF+DEID+ R S A ++ M L + LD D +V ++ ATNRP LD A++R R+ + I P + R ILK+ +D V + +GF+G+DL+ +C +A + +R +E + V +D +A+ K+ ++K Sbjct: 106 TVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.551e-27 Identity = 84/274 (30.66%), Postives = 146/274 (53.28%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG---------KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-----IDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH-----------EDF---MKAVRKLNEAKKLESSAHYNADFGKE 740 ++ P + P+LF + +P +G+LL+GPPGTGKT+LARA+A+ + F + +S++ K++GES +L+R +F A+ P IIF+DEID++ R S+G + +R E L Q + +V ++ ATN P +D A R R R+ IPLP+E +R ++H + K+ + D EA+VK E ++G+DL + +A M +R+ + ++ +DF +K +R + LE + ++ +FG + Sbjct: 474 AVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETS-RRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTR----RLHLNNLLKYQKHSLSLEDIEAIVKATEYYSGSDLTALAKDAAMGPLRSLGESLLFTKMESIRPINLDDFKTSIKVIRPSVNLQGLERYSEWDKEFGSQ 739
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL2_XENLA (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis GN=katnal2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.828e-25 Identity = 68/215 (31.63%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK------IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ P+ P+LF + + P KG+LLYGPPGTGKTLLA+A+A+ + F + +S I+ K+ G+S +L+R +F AR H P IF+DE++++ +R GT P LD A+LR RL+++I + LP++++R +++ +++G+ ++DY + + +G++G+D+R VC EA M +R Sbjct: 273 AVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR---GTG---------------------------------PGELDYAMLR--RLEKRILVDLPSKEARQAMIQHWLPPISNSSGVELRMDLDYSTLGEETDGYSGSDIRLVCKEAAMRPVR 448
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.118e-25 Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 3 Query: 15 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG---------KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 P + PELF + +P +G+LL+GPPGTGKT+LARA+A+ A F + +S++ KY+G+S +L+R +F A+ +IF+DEID+I R G + +R E L Q +V ++ ATN P +D A R R ++ IPLP +++R + L H H E D E +V L EG++G+D+ + +A M +R Sbjct: 398 PFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESS-RRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLS-HLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLR 608
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FIGN_MOUSE (Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.021e-24 Identity = 77/246 (31.30%), Postives = 130/246 (52.85%), Query Frame = 3 Query: 60 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF--DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA------------ERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 P+ +LL+GP GTGKTLL R IAS + A F K+ S ++ K+IGE+ ++I F AR QP +IF+ +ID + + SE S + R E L QLD ++ +I AT++P+ +D +L R +++ IPLP+ +R +I+ + +H + ++ +V+ EGF+G D+ ++C EA + + A + V ++DF A K+ + K+L+ +N FG Sbjct: 519 PRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHS---PVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQII---VQLLTQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEAAVGPLHAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMYVEWNKMFG 756
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.310e-23 Identity = 75/246 (30.49%), Postives = 131/246 (53.25%), Query Frame = 3 Query: 60 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF--DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA------------ERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 P+ +LL+GP GTGKTLL R IAS + A F K+ S ++ K++GE+ ++I F AR QP +IF+ +ID + + +E S + R E L QLD ++ +I AT++P+ +D +L R +++ IPLP+ +R +I+ +++H + ++ +V+ EGF+G D+ ++C EA + + A + V ++DF A K+ + K+L+ +N FG Sbjct: 519 PRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVNEEHS---PVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQII---VQLLSQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEAVVGPLHAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMYVEWNKMFG 756
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23 Identity = 63/213 (29.58%), Postives = 116/213 (54.46%), Query Frame = 3 Query: 60 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK 695 P+ VL +G PGTGKT+LA+++A+ + + ++++I +++G+ AR I E++ A P +IF+DE+DAIG RRF S ++ + LL ++DG +Q V I ATN P++LD A+ R + +IE LP + R +L+ + + + + +VKL +G +G D++ + + A+ + + ++ K + K Sbjct: 157 PRNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQ---SLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEYALKERDLK 364 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |