DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.979e-68 Identity = 119/223 (53.36%), Postives = 168/223 (75.34%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 671 S+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 200 SVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 258.84 bits (660), Expect = 2.979e-68 Identity = 120/232 (51.72%), Postives = 170/232 (73.28%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 S+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I IH + + +++ ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ + KK Sbjct: 199 SVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.979e-68 Identity = 119/223 (53.36%), Postives = 168/223 (75.34%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 671 S+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 200 SVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.890e-68 Identity = 122/227 (53.74%), Postives = 168/227 (74.01%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 ++ELPL+ PELF +VGI+PPKGVLLYGPPGTGKTLLA+A+A+ A F++++ S ++ KYIGE AR++RE+F A++ P IIF+DEID+IG +R TS DRE+QRTL++LL ++DGFD G V+++ ATNRPD+LDPALLRPGR DR I++P+P ++R +ILKIHA + ++D + + + +GADL + EAGM AIR RD V DF AV K+ Sbjct: 174 TVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKV 400
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.890e-68 Identity = 126/230 (54.78%), Postives = 169/230 (73.48%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEA 692 ++ LP+ NP LF +GI PPKGVLL+GPPGTGKTLLA+A+A +A F++VV S +++K+IGE ARL+RE+F AR+ P I+F+DEIDAI +R GTS DRE+QRT+++LL +LDGFD L VK+I ATNR D++DPA+LRPGR DR IE+PLP+ + R+EIL IH ++D EA+ KL EGF+GADL+ V EAG +AIR + +D +KAV K+ A Sbjct: 154 AVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAA 383
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.636e-68 Identity = 126/228 (55.26%), Postives = 167/228 (73.25%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 686 ++ELPL PE+F ++GI+PPKGVLL+GPPGTGKTLLARA+A +A+FL+VV S ++ KYIGE ARL+RE+F A+ P IIF+DEIDAIG R TS DRE+ RTLM+LL ++DGF G V++I ATNR D+LD ALLRPGR DR IEIP P+ + R+ IL IH AG+ ++D + +G NGADLR++C EAGM AIR++ + V EDF +++ K + Sbjct: 168 AVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEKFS 395
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.666e-68 Identity = 124/232 (53.45%), Postives = 171/232 (73.71%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 ++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++ +CTEAG+ A+R R V H DF KA K+ KK Sbjct: 203 AVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKK 434
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.666e-68 Identity = 124/232 (53.45%), Postives = 171/232 (73.71%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 ++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++ +CTEAG+ A+R R V H DF KA K+ KK Sbjct: 203 AVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKK 434
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 4.301e-67 Identity = 127/226 (56.19%), Postives = 167/226 (73.89%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PE F +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++ VCTEAGM A+R R +V EDF AV K+ Sbjct: 160 IELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSR-LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 384
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 5.617e-67 Identity = 122/232 (52.59%), Postives = 171/232 (73.71%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 ++ELPL +PEL+ +GI+PPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++ +CTEAG+ A+R R V H DF KA K+ KK Sbjct: 208 AVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVMFKKK 439 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |