DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.135e-66 Identity = 121/239 (50.63%), Postives = 173/239 (72.38%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 719 +I LP+ + E F ++G++PPKGVLLYGPPGTGKTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE P P E++R IL+IH+ + + ++++E + + + FNGA L+ VC EAGM A+R + V HEDF + + ++ +AKK S +Y Sbjct: 185 AIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQV-QAKKKASLNYY 422
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 2.135e-66 Identity = 122/241 (50.62%), Postives = 174/241 (72.20%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNA 725 +I LP+ + + F ++GI+PPKGVLLYGPPGTGKTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE P P+E++R IL+IH+ + + ++++E + + + FNGA L+ VC EAGM A+R + V HEDF + + ++ KK SS +Y A Sbjct: 191 AIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKK--SSLNYYA 429
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 251.521 bits (641), Expect = 4.755e-66 Identity = 125/226 (55.31%), Postives = 163/226 (72.12%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGV+LYGPPGTGKTLLARA+A + D F++V + ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPALLRPGR+DRKIE P P+ +R EIL+IH+ + I+ V + G +GAD++ VCTEAGM A+R R +V EDF AV K+ Sbjct: 164 IELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKV 389
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 251.136 bits (640), Expect = 6.211e-66 Identity = 122/239 (51.05%), Postives = 173/239 (72.38%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 719 +I LP+ + E F ++GI+PPKGVLLYGPPGTGKTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE P P E++R IL+IH+ + + ++++E + + + FNGA L+ VC EAGM A+R + V HEDF + + ++ +AKK S +Y Sbjct: 185 AIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 422
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 250.366 bits (638), Expect = 1.059e-65 Identity = 125/227 (55.07%), Postives = 164/227 (72.25%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA-DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K++M TNR D+LDPALLRPGR+DRKIE P P + R++ILKIH+ + I+ + + G +GA+L+ VCTEAGM A+R R +V EDF AV K+ Sbjct: 161 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKV 387
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.384e-65 Identity = 123/227 (54.19%), Postives = 164/227 (72.25%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA-DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGV++YGPPGTGKTLLARA+A + D F++V S ++ KYIGE ++++RE+F AR+H P IIFMDEID+IG R G D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPALLRPGR+DRKIE P PNE +R++ILKIH+ + I+ + + G +GA+++ CTEAGM A+R R +V ED AV K+ Sbjct: 172 IELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKV 398
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.082e-65 Identity = 119/227 (52.42%), Postives = 167/227 (73.57%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 +IELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD VK+IMATNR + LDPAL+RPGR+DRKIE PLP+ +++ +I +IH A + +++ E V + +GAD++ +CTE+G+ A+R R V H DF KA K+ Sbjct: 199 AIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKV 425
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.258e-65 Identity = 120/237 (50.63%), Postives = 170/237 (71.73%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSA 713 S+ELPL NPEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV + +I +Y+GE +L+RE+F A H P IIF+DEIDAIGG+R++ + RE+QRT++ELLNQLDGFD +K+IMATN+ + LDPAL+RPGR+DRKIE +P+ ++ +I IH + + ++ E ++ E +GAD++ +CTEAGM A+R R V +DF+ A K+ +K+ SA Sbjct: 184 SVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKVFFSKQKMVSA 420
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.258e-65 Identity = 115/232 (49.57%), Postives = 169/232 (72.84%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 ++ELPL +PE + +GI+PPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ +++RE+F A ++ P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK++MATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + E++ E + + +GAD++ +CTEAG+ A+R R V EDF K+ + KK Sbjct: 203 AVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.998e-64 Identity = 117/232 (50.43%), Postives = 166/232 (71.55%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 ++ LP+ + E F +GIKPPKGVL+YGPPGTGKTLLARA A+ ++ +LK+ ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF +K+I ATNR D+LDPALLR GRLDRKIE PLPNE++R IL+IH+ + +++++ + + +E FNGA L+ VC EAGM A+R +IH DF++ ++ KK Sbjct: 183 AVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKKK 414 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |