CN185912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_THEVO (30S ribosomal protein S19P OS=Thermoplasma volcanium GN=rps19p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28 Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 136 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 K+FS++G L+ L +MS +EL+K+ ARARR R + L++KL G+ + ++TH+R++II+P +G I+ VYNG ++++ EIKPEMIGHYL EF ++ K VKH PG+GAT SS+F+PLK Sbjct: 28 KEFSYKGYTLEQLQEMSLEELIKILPARARRSLSREMNHDQKKLVEKLE--------GDYDD-IKTHVRDVIILPSYVGKIVEVYNGNSYSKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_PYRAR (30S ribosomal protein S19P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps19p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28 Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 142 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 F +RG L+ LL+M DE +KL AR RR +RGLK + L++K+RKAKR A G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 30 FRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVV-IKTHCRDMIILPEMVGLTIQVYNGITYIPVYISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 159
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_METMJ (30S ribosomal protein S19P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps19p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.825e-28 Identity = 64/140 (45.71%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 115 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 +P++R ++F++RG + L M+ EL+ L ARARR+F RGL R+ L+ LR E +RTHLR+MII+PEM+G I ++NGK F +VEI+PE + HYL EF+++ + V HG GIGAT SS+++PLK Sbjct: 9 MPRRR--EEFTYRGYSVADLQQMALSELLPLMPARARRKFDRGLSREHEKLLADLRSGD---------ENIRTHLRDMIIMPEMVGRSIEIHNGKEFQKVEIQPEAVFHYLGEFALTRRRVAHGSAGIGATRSSKYVPLK 137
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_THEPD (30S ribosomal protein S19P OS=Thermofilum pendens (strain Hrk 5) GN=rps19p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27 Identity = 62/136 (45.59%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 139 KFSFRGVDLDALLDMSNDELVKLFSARARRR----FQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 KF++RG L+ L M ++L ++ AR RR F++G + + L++K+R+A + A G+K ++THLR+ II+PEM+G I V+NGK F VEI PE IGHYL EF+++ K V+HG PG+ AT SS F+ LK Sbjct: 6 KFTYRGYTLEELRQMPIEKLAEIMPARQRRSLLRVFKQGTSEEHLKLLEKIRRAAKLASEGKKQPVIKTHLRDFIILPEMVGLTIHVHNGKEFVPVEITPEKIGHYLGEFALTTKKVEHGEPGLKATRSSMFVALK 141
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_HALSA (30S ribosomal protein S19P OS=Halobacterium salinarium GN=rps19p PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27 Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 139 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 +F++RG DLD L +MS +++ +L AR RR RGL + ++ + R++ E P+RTHLR+M ++PE +G VY G+ F +VE++PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANN---PIRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_HALS3 (30S ribosomal protein S19P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps19p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27 Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 139 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 +F++RG DLD L +MS +++ +L AR RR RGL + ++ + R++ E P+RTHLR+M ++PE +G VY G+ F +VE++PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANN---PIRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_THENV (30S ribosomal protein S19P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps19p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27 Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 142 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 F +RG L+ LL++ DE +KL AR RR +RGLK + L++K+RKAKR A G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 29 FRYRGKTLEELLNLPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVT-IKTHSRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKVVQHGEPGLKATRSSLHIAAK 158
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_HALWD (30S ribosomal protein S19P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps19p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27 Identity = 63/133 (47.37%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 139 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKP-EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 +F++RG LD L MS +++ L AR RR +RGL + +KLR+ R+A P + +P+RTHLR+M I+P + I VYNG++F +V I+PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHTLDELQAMSLEDITALLPARQRRTIERGLTTEQ----QKLRETVRDADPQKTANDPIRTHLRDMPILPSFVEKTIAVYNGQSFERVRIEPEMIGHYLGEFQLTRTSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_PICTO (30S ribosomal protein S19P OS=Picrophilus torridus GN=rps19p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27 Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 136 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 K+FS+RG L+ L +M +EL+ L ARARR + R + + L +KL G+K E ++TH+R++I++P+ +G I +YNG ++ + EIKPEMIGHYL EF+++ K VKH PG+GAT SS+F+PLK Sbjct: 28 KEFSYRGHSLEELQNMELNELLPLLPARARRSYSRQMNHEQEKLYEKLL--------GDK-ENIKTHVRDLIVLPQFVGKTIELYNGNSYIKFEIKPEMIGHYLGEFALTRKEVKHSGPGVGATRSSKFLPLK 151
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_CALMQ (30S ribosomal protein S19P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps19p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27 Identity = 67/134 (50.00%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 133 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 +K F +RG D L+ M +E +KL AR RR +RGL+ L++K+RKAK A G K PVRTH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT S+ I K Sbjct: 55 WKNFKYRGFTFDELMKMPMNEFIKLLPARQRRTLKRGLRPCHRQLLEKIRKAKAFAAKG-KSIPVRTHCRDMIILPEMVGLTIFVYNGITYIPVPISPWHIGHYLGEFAITTKIVQHGEPGLKATKSTLHIAAK 187 The following BLAST results are available for this feature:
BLAST of CN185912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185912 ID=CN185912; Name=CN185912; organism=Citrus sinensis; type=EST; length=714bpback to top |