DC900083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.852e-34 Identity = 79/173 (45.66%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ K KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVILVD H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 22 LQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRANSKK 192
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.852e-34 Identity = 79/173 (45.66%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ K KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVILVD H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 22 LQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRANSKK 192
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_PYRKO (50S ribosomal protein L15e OS=Pyrococcus kodakaraensis GN=rpl15e PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.844e-33 Identity = 79/180 (43.89%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 10 RGKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 + K+S V L++ R ++R+ P + R+ RPTR D+AR LGY+AKQ KG KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGK+ RGL KG K RPS RA Sbjct: 12 KSPKKSYVGELLKK-RMIQWRRDPVVKRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGKRSRGLLNKGKGAEKVRPSIRA 188
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.039e-32 Identity = 75/173 (43.35%), Postives = 100/173 (57.80%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ K KP G+ ++ +S + +AEERA ++ + VLNSYW+ +D K++E+ILVDP H +I+ND +WL HK R RGLTSAGKK RGL KG KARP RA K+ Sbjct: 22 LQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRANGKK 192
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.541e-32 Identity = 82/186 (44.09%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 16 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHKARPSRRATWKR 561 K++S + L R R E+R+ PS+VR+ +PTR DKAR LGYKAK +P GV +S R +AEERA RK GL VLNSY++ ED YK++EVILVDP H +I NDP +NW+C P ++ R RGLTSAGKK RGLR +G +++K WKR Sbjct: 14 KEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLRGTVYYK--------WKR 189
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.931e-32 Identity = 77/173 (44.51%), Postives = 99/173 (57.23%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 L + R ++R+ PS+ R+ RPTR ++ARRLGY+AK K +P G + +SK+ +AEERA RK L VLNSYW+ ED YKY+EVI+VDP H I++D RINW+C K R RG T AGKK RGLR +G K RPS RA +R Sbjct: 25 LLKERLPKWRKGPSVQRIKRPTRIERARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSDHRINWICQKSQKGRVFRGKTGAGKKARGLRKRGKGAEKVRPSLRAHRRR 195
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_HALSA (50S ribosomal protein L15e OS=Halobacterium salinarium GN=rpl15e PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.747e-32 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 570 LQ R ++R+ +I RV RPTR DKAR LGYKAKQ K G+ T QGV ++ ++ + +AEERA RK LR LNSYW+ ED + K+FE IL+DP H AI+ND +NW+C+ HK+R RG TSAG++ RGL+ +G RPS A KRN + Sbjct: 24 LQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_HALS3 (50S ribosomal protein L15e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.747e-32 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 570 LQ R ++R+ +I RV RPTR DKAR LGYKAKQ K G+ T QGV ++ ++ + +AEERA RK LR LNSYW+ ED + K+FE IL+DP H AI+ND +NW+C+ HK+R RG TSAG++ RGL+ +G RPS A KRN + Sbjct: 24 LQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.726e-31 Identity = 79/177 (44.63%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 34 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 M L R R ++R+ P+I+R+ +PTR D+AR LGYKAKQ KG +P G+ +S R +AEERA RK L VLNSY++ ED YK++EVILVDP H AI NDP I W+C H+ R RGLTSAGKK RGLR L + + + WKR Sbjct: 21 MLTLMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPNKG---RRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLRKSRGLKY----TIKYKWKR 190
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_AERPE (50S ribosomal protein L15e OS=Aeropyrum pernix GN=rpl15e PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.254e-31 Identity = 81/172 (47.09%), Postives = 100/172 (58.14%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLH--HKARPSRRA 549 L + R E+R+ PSI+RV +PTR D+AR LGYKAKQ KG +P GV +S R +AEERA RK L VLNSY++ ED YK++EVILVDP H AI+NDP +NW+ HK R RGLTSAGKK RGLR L HK + ++A Sbjct: 24 LMKARLLEWRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNKG---RRPKRMGVYGFAPAKSLRLIAEERAQRKYPNLVVLNSYYVGEDGRYKWYEVILVDPNHPAIKNDPELNWVTTGKHKGRPFRGLTSAGKKMRGLRKSRGLKGTHKYKWKKKA 192 The following BLAST results are available for this feature:
BLAST of DC900083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900083 ID=DC900083; Name=DC900083; organism=Citrus sinensis; type=EST; length=904bpback to top |