DC900083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_NATPD (50S ribosomal protein L15e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl15e PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.558e-31 Identity = 76/173 (43.93%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 LQ R E+R +I R+ RPTR DKAR LGYKAKQ K K QGV ++ +++ + +AEER+GRK LRVLNSYW+ ED + K+FEVIL+DP H AI+ND ++W+C+ + R RG TSAG++ RG + +G RPS RA KR Sbjct: 24 LQWQRQQEWRDQGAIERIERPTRLDKARSLGYKAKQGVVVARVSVRKGTARKQRFKAGRRSK--RQGVNKITRRKNLQRIAEERSGRKFRNLRVLNSYWVGEDGSQKWFEVILLDPEHGAIQNDDDLSWICDDSQRGRAYRGRTSAGQRGRGQQKRGKGTEHTRPSIRANDKR 194
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_HALWD (50S ribosomal protein L15e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl15e PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.461e-30 Identity = 75/167 (44.91%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 540 LQ R E+R +IVR+ RPTR DKAR LGYKAKQ K G+ + QGV +L + S + +AEERA RK LR L SYW+ ED + K+ E+IL+DP H AI ND +NW+C+ HK R RGLT+AG+ RGL+ +G RPS Sbjct: 24 LQWQRKQEWRDQGAIVRIDRPTRLDKARELGYKAKQGVIIARVAVRKGGARK---KRFTSGRRSKRQGVNRLGRRTSIQRIAEERAARKYPNLRTLASYWVGEDGSQKWHEIILIDPEHAAIENDDDLNWICDDTHKGRAFRGLTNAGRSNRGLQNRGKGAEHTRPS 187
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.908e-30 Identity = 73/167 (43.71%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 34 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 534 +R L R ++R+ P I R+ RPTR D+AR LGY+AK K +PT GV ++ +S + +AEER RK + VLNSYW+ ED YK++EVILVDP H AI+NDP+I W+C H+ R RGL S GKK RGLR +G K R Sbjct: 18 VRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFKA--GRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRGKGAEKVR 182
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_HALLT (50S ribosomal protein L15e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl15e PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.492e-30 Identity = 78/166 (46.99%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 540 LQ R E+R +I R+ RPTR DKAR LGYKAKQ K K QGV +L ++S + ++EERA RK LRVLNSYW+ ED + K+ EVILVDP H AI ND + W+ + HK R RGLTSAG K RG R +G K RPS Sbjct: 24 LQWQRKQEWRDEGAIERIERPTRLDKARELGYKAKQGVVVARVSVRKGGSRKQRHKAGRRSK--RQGVNRLSRRKSIQRISEERASRKYRNLRVLNSYWVGEDGSQKWHEVILVDPNHPAIENDGDLGWIASDDHKGRAFRGLTSAGTKGRGQRTRGTGTEKTRPS 187
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.251e-30 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 534 L R R ++R+ P I+R+ +PTR D+ARRLGYKAK K G+ P GV ++ ++S + +AEER RK L VLNSYW+ ED KY+EVILVDP +I++D +INW+C+ H R RGLTSAGKK RGL KG K R Sbjct: 25 LMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGKGAEKVR 186
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METHJ (50S ribosomal protein L15e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl15e PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.251e-30 Identity = 77/170 (45.29%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 55 RCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPT-NQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 R ++R+ SIVRV RPTR D+AR LGYKAKQ V G+ T GV + +S + +AEERA RK + VLNSYW+ ED K++EVIL+DP H +I ND +NW+ P H+ R RGLTSAG K RG+R +G K RPS RA R Sbjct: 28 RMQDWRREGSIVRVRRPTRIDRARALGYKAKQGIVVVRVKVRRGGRRASRY---VRGRRTARMGVNRKTMGKSIQRIAEERACRKYPNMEVLNSYWVGEDGRQKWYEVILLDPHHPSIINDKTLNWISKPGHRGRSERGLTSAGVKGRGMRRRGKGTEKCRPSVRANANR 194
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METBU (50S ribosomal protein L15e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.700e-29 Identity = 70/174 (40.23%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 46 QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRN 564 +R++ W R+ S+ RV RPTR D+AR LGYKAKQ + G+ T G ++ +S + ++EERA RK + VLNSYW+ ED K++EVILVDP+H I++D +NW+C H R RG TSAG+K RG++ +G K RPS R+ R+ Sbjct: 27 ERLQVW--RKEGSVTRVERPTRIDRARSLGYKAKQGIVVARVKVRRGSMRKSRY---IRGRRTQHTGKNKITVGKSIQRISEERAARKYPNMEVLNSYWVGEDGKQKWYEVILVDPSHPVIKSDKNLNWICGKAHSGRVFRGKTSAGRKGRGMQTRGTGTEKTRPSVRSNLNRS 195
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULIY (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 528 R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 24 RQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULIN (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 528 R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 24 RQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULIM (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 528 R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 24 RQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185 The following BLAST results are available for this feature:
BLAST of DC900083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900083 ID=DC900083; Name=DC900083; organism=Citrus sinensis; type=EST; length=904bpback to top |