DC900083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULIL (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 528 R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 24 RQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULIK (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 528 R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 24 RQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULIA (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.016e-29 Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 528 R R E+R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 24 RQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_ARCFU (50S ribosomal protein L15e OS=Archaeoglobus fulgidus GN=rpl15e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.332e-28 Identity = 72/175 (41.14%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 55 RCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX------KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 R ++R+ P++VR+ RPTR D+AR LGYKAK+ KG++ + T + ++ + +AEERA RK + VLNSYW+ ED YK+FEVILVD H AI++DP+++W+ + R RGLTSAG+K RGLR KG K RPS RA +++ Sbjct: 27 RLQKWRREPAVVRIPRPTRLDRARALGYKAKKGIIVVRVRIRRGGRRATRPNKGRKSKGLMVNRRTPK--------KNLQWIAEERANRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSRT--RGRVYRGLTSAGRKARGLRRKGRGAEKVRPSLRANFRK 191
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.046e-28 Identity = 73/181 (40.33%), Postives = 97/181 (53.59%), Query Frame = 1 Query: 16 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 558 K ++ LQ R ++R+ P++VRV +PTR D+AR LGYKAKQ K KP + ++ +S + +AEERA ++ L VLNSY + ED K++EVIL+D H +I+ND LC H +R RGLTSAGKK RGL KG K RP RA K Sbjct: 13 KPSESYVKGLQWARMQDWRKEPTVVRVEKPTRIDRARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGLMNKGKGAEKVRPGIRANKK 191
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULTO (50S ribosomal protein L15e OS=Sulfolobus tokodaii GN=rpl15e PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.196e-28 Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1 Query: 22 QSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHK 528 QSD + + R R E+R+ P++ R+ +PTR ++AR +GYKAKQ +P GV + R +AEE+A RK L VL SY++ ED YKY+E+I+VDP H I++DP + WL +P ++ R RGLTSAGKK RGL RG KG + HK Sbjct: 14 QSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGLLKSRGLKGTVKHK 184
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULSO (50S ribosomal protein L15e OS=Sulfolobus solfataricus GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLR 504 R R ++R+ PSIVR+ +PTR ++AR LGYKAKQ KG +P GV + R +AEERA RK L VL SY++ ED YKY+E+++VDP+H I++DP+ WL +P +++R RGLTSAGKK RGLR Sbjct: 24 RQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLR 173
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METAC (50S ribosomal protein L15e OS=Methanosarcina acetivorans GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28 Identity = 73/175 (41.71%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 46 QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRS-------VAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 +R++ W R+ S+ R+ RPTR D+AR LGYKAKQ G+ + +P N+G K ++K S +AE RA R+ L VLNSYW+ ED +K+FEVILVDP H I++D +NW+C+P + R RG TSAG+K RG+ +G K RPS RA Sbjct: 27 ERLQVW--RKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRG--------GLGHVRP-NRGRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRKGRGMATRGKGTEKTRPSIRA 190
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METS5 (50S ribosomal protein L15e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.863e-28 Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 49 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHK-ARPSRRATWKRNN 567 R R E+R ++ R+ +PTR D+AR LGYKAKQ +P GV +S + +AEE+A RK GL VL SY++ ED YKY+EVILVDP + I +DP+ NWL NP ++ R RGLTSAG++ RGL RG KG +H+K AR + K+ + Sbjct: 24 RQRLVEWRNQNTVTRIEKPTRLDRARALGYKAKQGIIVARVKVEKGGMDKQRPNS--GRRPKRMGVYGFSPAKSLQFIAEEKAARKFPGLEVLGSYYVAEDGKYKYYEVILVDPHNPVIMSDPQFNWLKNPANRGRVFRGLTSAGRRTRGLLKSRGLKGTIHYKIARKKKEREQKKRH 199
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METMJ (50S ribosomal protein L15e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.863e-28 Identity = 76/178 (42.70%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 22 QSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXX-KGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 +S+V L +R++ W R+ SIVRV PTR D+AR LGYKAKQ +G + G+ +L +S + +AEERA RK + LNSYW+ ED K+FEVILVD H +I++D + WL NPVH+ R RG TSAG K RG+R +G K RPS R+ Sbjct: 18 RSEVKALLWERLQTW--RREGSIVRVEHPTRIDRARSLGYKAKQGIVVVRVKIRRGGRRKPRYTRG---RRSARMGMRRLTPAKSLQRMAEERASRKFPNMEALNSYWVGEDGRSKWFEVILVDGHHPSIKSDRNLAWLANPVHRGRAERGKTSAGMKGRGMRTRGRGTEKTRPSIRS 190 The following BLAST results are available for this feature:
BLAST of DC900083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900083 ID=DC900083; Name=DC900083; organism=Citrus sinensis; type=EST; length=904bpback to top |