CN185891

Overview
NameCN185891
Unique NameCN185891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5924 contig Csv1_Contig5924:98..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22
Identity = 56/151 (37.09%), Postives = 77/151 (50.99%), Query Frame = -3
Query:  270 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 722
            K +  +P AG SA  V + N+  W+  IIGP DT +E G F  +M F   YPN PP VKF ++++HPNVY  G +C+ IL               RW P +               PN  SPANVEA+  ++D R ++ K+V   V +S E
Sbjct:   14 KRMQTDPPAGVSASPVAD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDIL-------------QNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSWE 150          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 56/151 (37.09%), Postives = 77/151 (50.99%), Query Frame = -3
Query:  270 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 722
            K +  +P AG SA  V + N+  W+  IIGP DT +E G F  +M F   YPN PP+VKF +E++HPNVY  G +C+ IL               RW P +               PN  S ANVEA+  ++D R ++ K+V   V +S E
Sbjct:   14 KRMQTDPPAGVSASPVPD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDIL-------------QNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSWE 150          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K + ++P +G SA  + + N+ +W+  IIGP DT +E G F  ++SF   YPN PP VKF +E++HPNVY  G +C+ IL               RW P +               PN  SPANVEAA  ++D R  + K+V   V  S
Sbjct:   14 KRMQQDPPSGVSASPLPD-NVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDIL-------------QNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENS 148          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K L ++P  G S G   + NI  W+  I GP DT +E G F   + F   YPN PPTV+F ++++HPNVY DG +C+ IL               RW P +               PN  SPAN  AA+ +++ R +++K+V  CV +S
Sbjct:   14 KRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = -3
Query:  270 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 722
            K + ++P AG SA  V + N+  W+  IIGP DT +E G F  ++SF   YPN PP VKF + ++HPNVY +G +C+ IL               RW P +               PN+ SPAN EAA+  R+ + ++ ++V + V  S E
Sbjct:   14 KRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL-------------QNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSWE 150          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K L ++P  G S G   E NI +W+  I GP  T +E G F  ++ F   YPN PPTV+F ++++HPNVY DG +C+ IL               RW P +               PN  SPAN +AA+ +++ + +++K+V   V +S
Sbjct:   14 KRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K L ++P  G S G   E NI +W+  I GP  T +E G F  ++ F   YPN PPTV+F ++++HPNVY DG +C+ IL               RW P +               PN  SPAN +AA+ +++ + +++K+V   V +S
Sbjct:   14 KRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K L ++P  G S G   E NI +W+  I GP  T +E G F  ++ F   YPN PPTV+F ++++HPNVY DG +C+ IL               RW P +               PN  SPAN +AA+ +++ + +++K+V   V +S
Sbjct:   14 KRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K L ++P  G S G   E NI +W+  I GP  T +E G F  ++ F   YPN PPTV+F ++++HPNVY DG +C+ IL               RW P +               PN  SPAN +AA+ +++ + +++K+V   V +S
Sbjct:   14 KRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148          
BLAST of CN185891 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  276 KDLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTAEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 722
            K L ++P  G S G   E NI +W+  I GP  T +E G F  ++ F   YPN PPTV+F ++++HPNVY DG +C+ IL               RW P +               PN  SPAN +AA+ +++ + +++K+V   V +S
Sbjct:   14 KRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148          
The following BLAST results are available for this feature:
BLAST of CN185891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
UBC2_ASPFU2.996e-2237.09Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_NEUCR3.913e-2237.09Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBC2_CANAL3.913e-2236.91Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBCD6_DROME6.675e-2235.57Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC2_SCHPO1.139e-2135.76Ubiquitin-conjugating enzyme E2 2 OS=Schizosacchar... [more]
UBE2B_RAT1.942e-2134.23Ubiquitin-conjugating enzyme E2 B OS=Rattus norveg... [more]
UBE2B_RABIT1.942e-2134.23Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus c... [more]
UBE2B_MOUSE1.942e-2134.23Ubiquitin-conjugating enzyme E2 B OS=Mus musculus ... [more]
UBE2B_HUMAN1.942e-2134.23Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens ... [more]
UBE2B_BOVIN1.942e-2134.23Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185891 ID=CN185891; Name=CN185891; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTTTACTTAGAGAACGACAGAACATTTGTGACCAATTTTAAC
CAAAGAACGCTTTTGAATACATGGATGTTCCCCGTCGTTACAGTGACTTG
ACCATGCAGAGAAAACGAGAGAGATGGTTGAGAGAACTTCAAAATGCCAG
TCTACACAAGACCAAGTACCCACAGAACCCAGTTCCCCCCACGCGGTTAA
ATCAAGACATTTCCCGTACAAACACATAGGTAGAGAAAAAAAAGAGTGCC
TGCAGTTGGTTTACAACATTTCTTGTGATCTTCTCACACAGCGGCCTACT
TTCTTCTTGAAGTCATCTCTCCTGTCTCTCCATTCTTTTGCAGCTTCGAC
ATTTGCAGGAGATTCATCATTAGGACTGGAAAGCATTGATATGATACTCA
AAACGATACTTTCAGCAGTATGAACAGGCATCCAGCGCTCACTTGCGAGC
TCATATCCATTAGGGTCGTCACCTGGAGGATGAAGGATTGATATGCAGAC
ACGCCCATCCGGATAGACATTAGGATGCCAAATCTCTGTTGTAAACTTCA
CTGTAGGTGGGCTATTAGGGTAGTTTGATGGAAAGCTCATAATGGCATTG
AAAAATCCCCCCTCATAAAGAGTATCAGGTGGTCCAATAATTGTAACACT
CCATTCAAAGATATTTGTCTCATCCACCAACCCGGCAGAAAACCCAGCAA
CAGGGTTCTTACAAAGATCTTTTTAGTTGTTTT
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