CN185884

Overview
NameCN185884
Unique NameCN185884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185884 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.291e-12
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 2 
Query:   77 MSDTCGNCDCADRNQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 274
            MSD CG+CDCAD++QCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64
The following BLAST results are available for this feature:
BLAST of CN185884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
MT3B_ORYSI1.291e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185884 ID=CN185884; Name=CN185884; organism=Citrus sinensis; type=EST; length=739bp
AGGAGCAAAGCAAGTTTCGTACAATAAAGAGCCCTCTATTTCCAGTTTTA
AATTCCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGCAACTGC
GACTGCGCTGACAGGAACCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGC
TGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGTCATGG
ACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCCACCTGC
GCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACACATGCAG
CAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTTAAGAAT
AATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACTTCGTTTTTATG
ATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCACCCATCA
CTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATATGGCCAT
GGCCATGACCGTGGCCTTGTGTGGTTTAATTTTAATGTATTATTGTTAGC
CGCACCCTTGCCGACTATAACATTCAGAAGGAGTCCACCCTCCACCTGGT
CCTCCGTCTAAGAGGTGGAATGCAGATATTTGTGAAAACCCTGACTGGTA
AAACTATCACCTTGGAAGTTGAGAGTTCTGATACAATCGACAATGTCAAG
GCTAAGATTCAGGACAAGGAGGGAATCCCTCCTGATCAG
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