DC900074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SHELP (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=aroA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 83/212 (39.15%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G+ + L G PRM ERPIGDLV L LGAD+ + PP+ IN Q+ V I+I +L+S PY+++T+ LM +FGV V + D + RF I GQKY SPG VEGDASSASYF G G S+QGDVKFAE LE MGA+ W ++ + PL VD++MN Sbjct: 109 GSGEFTLTGEPRMEERPIGDLVDALNALGADIRYLKQPGFPPLTINATGLNGGDVEIAGDLSS-QFLTALLMVTPLAKAQVNIKIKGELVSKPYIDITIALMAQFGVTVINHD-YQRFEIPAGQKYVSPGTVLVEGDASSASYFLAAGAIQGGEVKVTGVGLKSIQGDVKFAEVLEAMGAQIEWGDDFIIARSA--------PLHGVDLDMN 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SHEB9 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella baltica (strain OS195) GN=aroA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 84/212 (39.62%), Postives = 110/212 (51.89%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G + L PRM ERPIGDLV L+QLGA+V + PP+ IN Q+ G+V I + +L+S PY+++TL LM +FGV V + D + RF I GQ+Y SPG VEGDASSASYF G G S+QGDVKFA+ LEKMGA+ W ++ + G + L AVD++MN Sbjct: 109 GQGEFTLTCEPRMEERPIGDLVDALRQLGANVVYLKNDGFPPLTINATGLSGGDVEIAGDLSS-QFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITLALMAQFGVTVINHD-YARFEIVAGQRYVSPGKVLVEGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGAEIEWGDDYIIARG--------SQLTAVDLDMN 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SALSV (3-phosphoshikimate 1-carboxyvinyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=aroA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 77/212 (36.32%), Postives = 111/212 (52.36%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G +L G PRM+ERPIG LV L+Q GA++D + N PP+R+ Q+ + I + +L+S PY+++TL LM+ FGV + + + +F ++GGQ+Y SPG VEGDASSASYF G G S+QGD++FA+ LEKMGA TW ++ + T R L A+D++MN Sbjct: 109 GQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGEIEVDGSVSS--QFLTALLMTAPLAPEDTTIRVKGELVSKPYIDITLNLMKTFGVEIAN-HHYQQFVVKGGQQYHSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACT--------RGELHAIDMDMN 309
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SHEPW (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=aroA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 83/212 (39.15%), Postives = 111/212 (52.36%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G + L G PRM ERPIGDLV L+QLGADV + PP+ IN Q+ G+V I+I +L+S PY+++TL LM +FGV V + +++ F I+ GQ+Y SPG VEGDASSASYF G G S+QGDVKFA+ L +MGA W ++ + G + L AVD++MN Sbjct: 109 GQGEFTLTGEPRMEERPIGDLVDSLRQLGADVSYLKNDGFPPLTINATGLSGGDVEIAGDLSS-QFLTALLMVAPLAKGDVNIKIKGELVSKPYIDITLALMAQFGVNVTN-NNYVSFEIKTGQRYISPGKLLVEGDASSASYFLAAGAIKGGEVKVTGVGKLSIQGDVKFADVLAQMGADIEWGDDYIIARG--------SKLNAVDLDMN 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_PHOLL (3-phosphoshikimate 1-carboxyvinyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=aroA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 80/213 (37.56%), Postives = 109/213 (51.17%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMNK 703 G +L G PRM+ERPIG LV L+Q GA++D + N PP+ + Q+ + EI I +L+S PY+++TL LM+ FG+ + H D + F I+G Q+Y SPG+ VEGDASSASYF G G +SLQGD KFA LEKMGAK W ++ V R L +D++MN+ Sbjct: 109 GKNDVVLTGEPRMKERPIGHLVDALRQGGAEIDYLEQENYPPLHVKGGFVGGKVMVDGRVSS--QFLTALLMAAPLAENDSEIHIQGELVSKPYIDITLALMKSFGITINH-DQYQIFHIKGRQQYVSPGHYLVEGDASSASYFLAAAAIKGGTVRVTGIGKNSLQGDTKFANVLEKMGAKIRWGDDFVECE--------RGTLTGIDMDMNE 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_VIBVY (3-phosphoshikimate 1-carboxyvinyltransferase OS=Vibrio vulnificus (strain YJ016) GN=aroA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXV 631 G ++L G PRM+ERPIG LV L++ GA ++ + N PP++IN Q+ G V+I I+ +L+S PY+++TL +M++FGV V + +++ F I GQ Y SPG VEGDASSASYF G G +S+QGD+ FA+ LEKMGA+ W E+ V Sbjct: 109 GKGEFVLTGEPRMKERPIGHLVDALREAGAQIEYLENENYPPLKINATGLQAGTVNIDGSISS-QFLTAFLMAAPLAQGEVKIHIVGELVSKPYIDITLHIMKQFGVDVVN-NAYQEFIIPAGQSYVSPGQFLVEGDASSASYFLAAAAIKGGEIKVTGIGKNSIQGDIHFADALEKMGAEIEWGEDYV 295
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SHESW (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella sp. (strain W3-18-1) GN=aroA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 83/212 (39.15%), Postives = 110/212 (51.89%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G + L G PRM ERPIGDLV L++LGA+V + PP+ IN Q+ G+V I + +L+S PY+++T+ LM +FGV V + D + RF I GQ+Y SP VEGDASSASYF G G S+QGDVKFA+ LEKMGA W ++ + G +PL AVD++MN Sbjct: 109 GQGEFTLTGEPRMEERPIGDLVDALRKLGANVVYLKNDGFPPLTINATGLNGGDVEIAGDLSS-QFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITIALMAQFGVNVINHD-YARFEIVAGQRYISPCKVLVEGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARG--------SPLTAVDLDMN 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SHEPA (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=aroA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 81/212 (38.21%), Postives = 111/212 (52.36%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G + L G PRM ERPIGDLV L+QLGA+V + PP+ I+ Q+ +V I+I +L+S PY+++TL LM +FGV V++ D + F I+ GQ+Y SPG VEGDASSASYF G G S+QGDVKFA+ L++MGA+ W ++ + G L AVD++MN Sbjct: 109 GQGDFTLTGEPRMEERPIGDLVDALRQLGAEVSYLKNDGFPPLSISSTGLNGGNVEIAGDLSS-QFLTALLMVAPLAKDDVNIQIKGELVSKPYIDITLALMAQFGVKVQNND-YASFVIKAGQRYVSPGKVLVEGDASSASYFLAAGAIQGGEVKVTGVGKLSIQGDVKFADVLQQMGAEIEWGDDYIISRGA--------KLTAVDLDMN 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SHEDO (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=aroA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 83/212 (39.15%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G + L G PRM ERPIGDLV L+QLGA V + PP+ IN Q+ G V I I +L+S PY+++TL LM +FGV V++ D + RF I GQ+Y SPG VEGDASSASYF G G S+QGDVKFA+ LEKMGA W ++ + L +D++MN Sbjct: 109 GQGEFTLTGEPRMEERPIGDLVDALRQLGASVTYLKNDGFPPLTINATGLNGGDVDIAGDLSS-QFLTALLMVAPLAKGKVNINIKGELVSKPYIDITLALMAQFGVDVQNHD-YARFEINPGQQYLSPGKVLVEGDASSASYFLAAGAIAGGSVKVTGVGRLSIQGDVKFADALEKMGADIEWGDDFIIARSA--------KLSGIDMDMN 310
BLAST of DC900074 vs. ExPASy Swiss-Prot
Match: AROA_SALTY (3-phosphoshikimate 1-carboxyvinyltransferase OS=Salmonella typhimurium GN=aroA PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 77/212 (36.32%), Postives = 111/212 (52.36%), Query Frame = 2 Query: 65 GNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEXLEKMGAKXTWTENXVTVTGPPRDPYGRNPLRAVDVNMN 700 G +L G PRM+ERPIG LV L+Q GA++D + N PP+R+ Q+ + I + +L+S PY+++TL LM+ FGV + + + +F ++GGQ+Y SPG VEGDASSASYF G G S+QGD++FA+ LEKMGA TW ++ + T R L A+D++MN Sbjct: 109 GQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGDIEVDGSVSS--QFLTALLMTAPLAPKDTIIRVKGELVSKPYIDITLNLMKTFGVEIAN-HHYQQFVVKGGQQYHSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACT--------RGELHAIDMDMN 309 The following BLAST results are available for this feature:
BLAST of DC900074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900074 ID=DC900074; Name=DC900074; organism=Citrus sinensis; type=EST; length=704bpback to top |