CN185880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31 Identity = 67/153 (43.79%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 126 WRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLAT-GKNLLKTPKWV 581 WRLIT+F F G+F +F ++ RY + LE+G F R ADF++M +FGA+ L++LS I + + FLG + MLVY+WSR P Q+N +G++T A YLPW +L ++ G+ V D +GI GH+Y+FL + P GK LKTP+W+ Sbjct: 53 WRLITSFCFFGSFGFSFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAV-LMILSGIFV-QILFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDVFPFQEHGKRFLKTPQWL 203
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL3_MOUSE (Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.285e-30 Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 593 VWRLIT F F G F +L + RY LE+G F R ADF++M +FG + + +L + +FLG +L+ MLVYVWSR P+ ++N +GL+ +A +LPWA++ ++ G+ +V DLLGI+ GH+YYFL + P GK LL TP ++ L+ Sbjct: 54 VWRLITTFLFFGPLGFGFFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSL--FFLGQALMAMLVYVWSRRSPHVRVNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHIYYFLEDVFPNQPGGKRLLLTPSVLKLLL 209
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DER22_ARATH (Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 126 WRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIFRS-----YFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 596 WRL+TNF + ++F + +ARY LE+ F +TADFL+M++FGA L L+ IP + FL SL FM+VYVWS++ P ++ GL T A YLPW +L ++ G+ DLLG+IAGH YYFL ++P T + LKTP +++ L A Sbjct: 54 WRLVTNFLYFRKMDLDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGMIAGHAYYFLAEVYPRMTNRRPLKTPSFLKALFA 219
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DER21_ARATH (Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 3 Query: 126 WRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 596 WRL+TNF + ++F + +ARY LE+ F +T DFL+M++FGA L L+ IP + FL SL FM+VYVWS++ P ++ GL T A YLPW +L ++ G+ D LG+IAGH YYFL ++P T + LKTP +++ L A Sbjct: 54 WRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGKTTDFLYMLLFGATVLTGIVLIGGMIPYLSVSFSKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGMIAGHAYYFLAFVYPRMTDRRPLKTPSFLKALFA 219
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 73/189 (38.62%), Postives = 106/189 (56.08%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSY-FLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRL 683 +WRLITNF F G NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG + MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ DLLGI GH+Y+FL + P G +LKTP + K + P N ER G A+ G RL Sbjct: 54 IWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGF---LMTLFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPS-ILKAIFDTPDEDPNYNPLPEERPGGFAW-GEGQRL 237
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL2_HUMAN (Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 73/189 (38.62%), Postives = 106/189 (56.08%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSY-FLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRL 683 +WRLITNF F G NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG + MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ DLLGI GH+Y+FL + P G +LKTP + K + P N ER G A+ G RL Sbjct: 54 IWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGF---LMTLFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPS-ILKAIFDTPDEDPNYNPLPEERPGGFAW-GEGQRL 237
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL2_MOUSE (Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 72/189 (38.10%), Postives = 106/189 (56.08%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSY-FLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRL 683 +WRLITNF F G NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG + MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ DLLGI GH+Y+FL + P G +LKTP + + + P N ER G A+ G RL Sbjct: 54 IWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGF---LMTLFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDIFPNQPGGIRILKTPS-ILRTIFDTPDEDPNYNPLPEERPGGFAW-GEGQRL 237
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL1_DICDI (Probable derlin-1 homolog OS=Dictyostelium discoideum GN=derl1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVI-FGSPLVPDLLGIIAGHLYYFLTVLHPLATG-KNLLKTPKWVQKL 590 +WRLIT + + F L+ +Y LE + ++ D+L+ +IF ++ ++ I F YFLG + L+Y++SR P N YG + K YLPW L + G P D L I++GH++++LT ++P A G L+KTPK++ + Sbjct: 52 LWRLITAPCIISSLGPMFLFNLIFFYQYTTRLESLNYAGKSDDYLFCIIFISICNIIFGLI--FEYYFLGTMTIMSLIYIYSRMNPTGTSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIVSGHIFFYLTDIYPRANGVPALIKTPKFITNI 207
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL1_HUMAN (Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17 Identity = 58/202 (28.71%), Postives = 104/202 (51.49%), Query Frame = 3 Query: 123 VWRLITNFFFL----GTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPL-ATGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTTGVAFR--GRSYRLSD 689 +WR IT F+ GT + + + L + +Y LE G F+ R AD+L+M++F + +++ + L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ +L+G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++ G G+ +RL D Sbjct: 52 IWRPITATFYFPVGPGTGFL-YLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGD 250
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL1_BOVIN (Derlin-1 OS=Bos taurus GN=DERL1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17 Identity = 58/202 (28.71%), Postives = 104/202 (51.49%), Query Frame = 3 Query: 123 VWRLITNFFFL----GTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPL-ATGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTTGVAFR--GRSYRLSD 689 +WR IT F+ GT + + + L + +Y LE G F+ R AD+L+M++F + +++ + L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ +L+G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++ G G+ +RL D Sbjct: 52 IWRPITATFYFPVGPGTGFL-YLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGD 250 The following BLAST results are available for this feature:
BLAST of CN185880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185880 ID=CN185880; Name=CN185880; organism=Citrus sinensis; type=EST; length=712bpback to top |