CN185878

Overview
NameCN185878
Unique NameCN185878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:12..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.006e-46
Identity = 82/106 (77.36%), Postives = 95/106 (89.62%), Query Frame = 2
Query:  425 LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            L   +SDRYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I NGGIDTEEDYPY
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPY 107          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.392e-45
Identity = 101/231 (43.72%), Postives = 134/231 (58.01%), Query Frame = 2
Query:   59 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPY 223          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.430e-45
Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 2
Query:   59 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPY 223          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.575e-42
Identity = 92/208 (44.23%), Postives = 124/208 (59.62%), Query Frame = 2
Query:  119 SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            S  D SIV Y +   + +      + ++ +F +W +KH K Y  + EK  RFEIFKDNL++IDE N     Y +GLN F+DL+N+E++  Y+G+              + ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  N GI     YPY
Sbjct:   24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYVAQN-GIHLRAKYPY 220          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.575e-42
Identity = 95/215 (44.19%), Postives = 132/215 (61.40%), Query Frame = 2
Query:   98 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            LF++   S  D SIV Y +   + +      + ++ +FE+W +KH K Y  + EK  RFEIFKDNL++IDE N +N +Y +GLN FAD++N+E++  Y G+  G   T+  S   +  L      +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+DCD   + GCNGG    A + ++   GI     YPY
Sbjct:   17 LFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSY--EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGGYPWSALQ-LVAQYGIHYRNTYPY 221          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.334e-41
Identity = 94/219 (42.92%), Postives = 131/219 (59.82%), Query Frame = 2
Query:   95 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            L+FLF    A+  S         S +S    +D +M  FE W  ++G+ Y    EK +RF+IFK+N++ I+  NS N  +Y +G+N+F D+T  E+ + Y G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII N G+ TEE+YPY
Sbjct:    7 LVFLFLFLCAMWAS--------PSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPY 210          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.275e-41
Identity = 86/178 (48.31%), Postives = 113/178 (63.48%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  W + H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ YLG +F A  +SL   + ++       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+N GIDTE  YPY
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIINNNGIDTESSYPY 200          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.619e-41
Identity = 89/181 (49.17%), Postives = 115/181 (63.54%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  W + H + Y++  E   RF IFK N+ +I+E N++     +GLN FAD+TNEEYR+ YLG  F A  +SL+   S++     G    +SVDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AFE+II+NGGIDTE  YP+
Sbjct:   30 FTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDA--SSLEMTPSEKVF---GGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPF 204          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.926e-40
Identity = 94/221 (42.53%), Postives = 126/221 (57.01%), Query Frame = 2
Query:   83 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            M + +  +FT+   L +S +S       K        +    F  W   + KAY    E   R+E FK N+ ++   NS+     +GLN+ ADL+NEEYR  YLG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY
Sbjct:    1 MRLSITLIFTLI-VLSISFISAGNVFSHK--------QYQDSFIDWMRSNNKAYTHK-EFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPY 211          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.285e-40
Identity = 88/185 (47.57%), Postives = 113/185 (61.08%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            ++ W   H K Y    E+E R  I++ NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPY
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPY 215          
The following BLAST results are available for this feature:
BLAST of CN185878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSPL_SOLLC4.006e-4677.36Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP2_HORVU3.392e-4543.72Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU4.430e-4543.72Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
PAPA4_CARPA1.575e-4244.23Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
PAPA1_CARPA1.575e-4244.19Papain OS=Carica papaya PE=1 SV=1[more]
BROM1_ANACO1.334e-4142.92Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP5_DICDI2.275e-4148.31Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP6_DICDI6.619e-4149.17Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSP3_DICDI1.926e-4042.53Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATS_MOUSE3.285e-4047.57Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185878 ID=CN185878; Name=CN185878; organism=Citrus sinensis; type=EST; length=742bp
GCGTTATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTT
CTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTT
TTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGA
TAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTA
TGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCT
TTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTT
TATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACC
GGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCA
CGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTA
TCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGA
AAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGG
GCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGG
TAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCAT
ATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATT
ATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTAC
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