CN185878

Overview
NameCN185878
Unique NameCN185878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:12..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 88/214 (41.12%), Postives = 124/214 (57.94%), Query Frame = 2
Query:  113 VSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            V S L + +VSY    +  S       +    F  W   H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ YLG  F    ++L     ++    +      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDG--SALIGTEEEK----IFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPY 204          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 88/189 (46.56%), Postives = 113/189 (59.79%), Query Frame = 2
Query:  200 MGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            +G +E +  K GK Y    E+  R  +F D L+FI EHN        TY + +N F+DLT+EE           A +T +  +R     LP+     P +  VDWR KGAV  VKDQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II N GIDTE  YPY
Sbjct:   17 IGEWENFKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVL---------ATKTGMTRRRHPLSVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPY 196          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 81/194 (41.75%), Postives = 118/194 (60.82%), Query Frame = 2
Query:  164 SKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            S +S     D +M  FE W  ++G+ Y    EK  RF+IFK+N+  I+  N+ N  +Y +G+N+F D+TN E+ + Y G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII N G+ +   YPY
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFIISNKGVASAAIYPY 210          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  + V++GK+Y +  E  +RF IF ++L  +   N +   Y++G+NRF+D++ EE+++  LGA      T      +  +L R   ALP++ DWR+ G V+ VK+Q  CGSCW FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE+I  NGGIDTEE YPY
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-----AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPY 234          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 82/181 (45.30%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  218 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            W   +GK Y    E+  R  I++ NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y       LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPY
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPY 206          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 84/173 (48.55%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  227 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            ++GK Y  + E + RF IFK+NL  I   N +  +YK+G+N+FADLT +E++   LGA   A+  S   K S +       ALP++ DWR+ G V+ VKDQG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTE+ YPY
Sbjct:   65 RYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGA---AQNCSATLKGSHKVTEA---ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPY 231          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37
Identity = 87/194 (44.85%), Postives = 115/194 (59.28%), Query Frame = 2
Query:  191 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSMYLG-----ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            D +   +  + ++H K Y    E+  R +IF +N   I +HN        +YK+GLN++AD+ + E++    G      +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 212          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37
Identity = 90/225 (40.00%), Postives = 128/225 (56.89%), Query Frame = 2
Query:   95 LLFLF-TVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            L+F+F +VS   D  ++      E++     ++D     F  +  K GK Y ++ E   RF +FK NL     H   + + + G+ +F+DLT  E+R  +LG + G K    K       LP   + LP+  DWR +GAV  VK+QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  E+DYPY
Sbjct:   13 LIFVFVSVSVCGDEDVLIRQVVDETEPKVLSSEDH----FTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLP--KDANQAPILPT--QNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPY 229          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.993e-37
Identity = 84/187 (44.92%), Postives = 115/187 (61.50%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R  +LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+++++GG+  E+DY Y
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAY 229          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            ++ W   +GK Y    E+  R  I++ NL+ +  HN E+     +Y++G+N   D+T+EE  S+       + R   +  R+  Y     + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPY
Sbjct:   28 WDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-----MSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPY 206          
The following BLAST results are available for this feature:
BLAST of CN185878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSP4_DICDI6.850e-3841.12Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CRUST_PANBO6.850e-3846.56Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
ANAN_ANACO6.850e-3841.75Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
ALEU_HORVU6.850e-3845.25Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATS_HUMAN1.168e-3745.30Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
ALEU_ARATH1.168e-3748.55Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATL_SARPE1.526e-3744.85Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
A494_ARATH1.526e-3740.00Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP_PEA1.993e-3744.92Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATS_BOVIN2.603e-3744.02Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185878 ID=CN185878; Name=CN185878; organism=Citrus sinensis; type=EST; length=742bp
GCGTTATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTT
CTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTT
TTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGA
TAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTA
TGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCT
TTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTT
TATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACC
GGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCA
CGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTA
TCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGA
AAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGG
GCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGG
TAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCAT
ATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATT
ATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTAC
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