CN185878

Overview
NameCN185878
Unique NameCN185878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:12..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 2
Query:  473 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            LP  VDWR KGAV  +K+Q  CGSCWAFS +AAVE INKI TG LISLSEQELVDCDT+ + GCNGG M+ AF++II NGGIDT+++YPY
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNGGIDTQQNYPY 89          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.755e-31
Identity = 61/90 (67.78%), Postives = 75/90 (83.33%), Query Frame = 2
Query:  473 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            LP+ +DWRKKGAV  VK+QGSCGSCWAFST++ VE IN+I TG+LISLSEQELVDCD   N GC GG   +A+++II+NGGIDT+ +YPY
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNGGIDTQANYPY 89          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31
Identity = 79/176 (44.89%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  227 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN--RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEEDYPY 742
            +HGKA+    E+  RF  FK N++     N++N    Y V   +FADLT +E+  +YL   + A+   LK+ + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A  +I+   NG + TE  YPY
Sbjct:   48 RHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVS-GKFADLTPQEFAKLYLNPDYYARH--LKNHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY 219          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31
Identity = 76/193 (39.38%), Postives = 109/193 (56.48%), Query Frame = 2
Query:  170 SSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII--DNGGIDTEEDYPY 742
            ++S   ++ +   F  +  KHG+ Y +  E+  R  +F++NL     H + N     G+  F+DLT EE+RS Y     GA   +   +R+   +       P +VDWR +GAV  VKDQG CGSCWAFS I  VE    +    L +LSEQ LV CD + + GC+GGLM+ AFE+I+  +NG + TE+ YPY
Sbjct:   25 TASLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHN---GAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPY 213          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.059e-30
Identity = 79/176 (44.89%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  227 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN--RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEEDYPY 742
            +HGKA+    E+  RF  FK N++     N++N    Y V   +FADLT +E+  +YL   + A+   LK  + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A  +I+   NG + TE  YPY
Sbjct:   48 RHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVS-GKFADLTPQEFAKLYLNPDYYARH--LKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY 219          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.807e-30
Identity = 75/189 (39.68%), Postives = 110/189 (58.20%), Query Frame = 2
Query:  206 MFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV-----GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            ++  W   + K YN   ++ +R  I++ N++ I EHN  +     TY +GLN+F D+T EE+++ YL         +  S+ SD     V       A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A+++ +   G++TE  YPY
Sbjct:   20 LWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYL---------TEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQY-LKQFGLETESSYPY 197          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.082e-30
Identity = 82/222 (36.94%), Postives = 117/222 (52.70%), Query Frame = 2
Query:   95 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLG-ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            +LFL  +   +D +  + D + + + + WRT             KHGK YN   E+ KR  +++ N + I+ HN E       + + +N F DLTN E+  M  G  R   K+T +       Y+P+        VDWR+ G V  VK+QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TEE YPY
Sbjct:    4 VLFLAILCLEVDSTAPTPDPSLDVEWNEWRT-------------KHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPK-------RVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPY 204          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.082e-30
Identity = 74/188 (39.36%), Postives = 110/188 (58.51%), Query Frame = 2
Query:  194 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            +   ++  W +K+ + Y +  ++  RF++F DNL +I   + ++E+ TY + LN+FAD++ +E+ S YL  R    +T+  +  +  +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DN G+   +DYPY
Sbjct:   21 DTANLYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLR--VPKTAKLNASNANFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADN-GLAEAKDYPY 200          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 72/186 (38.71%), Postives = 104/186 (55.91%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYL--------PRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            FE + + + K Y     K  RF+IFK NL  I+E N  N +    +N+F+DL+  E  + Y G    +K+ S   + +  +         P V + LP + DWR    +  VKDQG+CGSCWA + +  +E +  I    LI+LSEQ+L+DCD S N  C+GGLM  AFE +++ GG+  E DYPY
Sbjct:   32 FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLT--SKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLMHTAFEQLMNAGGLMEEIDYPY 214          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29
Identity = 72/184 (39.13%), Postives = 109/184 (59.24%), Query Frame = 2
Query:  194 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            ++  +F+ + + + + Y +  E   R  +F +N+    +  + +R T + G+ +F+DLT EE+R++YL      K    K K++      VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TE+DY Y
Sbjct:  182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLL-RKEPGNKMKQAKS----VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSY 359          
The following BLAST results are available for this feature:
BLAST of CN185878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
ERVB_TABDI3.640e-3170.00Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
ERVC_TABDI4.755e-3167.78Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
LMCPA_LEIME8.110e-3144.89Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP_TRYCR8.110e-3139.38Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP1_LEIPI1.059e-3044.89Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATLL_FASHE1.807e-3039.68Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
TEST2_RAT3.082e-3036.94Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATL2_PARTE3.082e-3039.36Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_NPVAH4.025e-3038.71Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATF_HUMAN1.529e-2939.13Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185878 ID=CN185878; Name=CN185878; organism=Citrus sinensis; type=EST; length=742bp
GCGTTATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTT
CTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTT
TTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGA
TAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTA
TGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCT
TTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTT
TATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACC
GGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCA
CGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTA
TCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGA
AAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGG
GCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGG
TAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCAT
ATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATT
ATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTAC
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