DC900070
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB2 (Putative agmatine deiminase OS=Shewanella baltica (strain OS223) GN=aguA PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.269e-62 Identity = 118/204 (57.84%), Postives = 147/204 (72.06%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE+ L+ YL V + IWL G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS A +L + DA+GRKL+I L PGPLY TEEE+ G+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+YE+VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTSAECLLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYSRSKAAFDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNNRIVFPLL-DPATDDIAAQKLQEIFPEYEIVGVP-AREILLGGG 357 HSP 2 Score: 26.5646 bits (57), Expect = 4.269e-62 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ P+
Sbjct: 357 GNIHCITQQIPS 368
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA1_LISMO (Putative agmatine deiminase 1 OS=Listeria monocytogenes GN=aguA1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.269e-62 Identity = 119/203 (58.62%), Postives = 152/203 (74.88%), Query Frame = 2
Query: 17 VLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
VLEGGSIHVDGEGT +TTEECLL++ RNP L+K QIE LK YL + KIIWL RG++ D+ TNGH+DN+ + +PGVV L+WTDD+TDPQYE S E ILS+ TDA+GRKL++ K++VP P+ +T+EE+ G++ PR G RLAASY+N+Y ANGG+I P FGD D A L Q +P EVVG+ +AREI+LGGG
Sbjct: 153 VLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDE-TNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGV-KAREILLGGG 352 HSP 2 Score: 26.5646 bits (57), Expect = 4.269e-62 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 624 GNIHCITQQQP 656
GNIHCITQQ P
Sbjct: 352 GNIHCITQQVP 362
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_PSEPK (Agmatine deiminase OS=Pseudomonas putida (strain KT2440) GN=aguA PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.566e-62 Identity = 112/203 (55.17%), Postives = 147/203 (72.41%), Query Frame = 2
Query: 17 VLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
VLEGGSIHVDGEGT +TTEECLLN+NRNPHL++ QIE L+ +L V ++WLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD DP Y R A+ +L + DA+GR+ + K+ +PGPL+ T EE AG++Q ++ R RLA SYVNF I NGGIIAP F D D EA +L++ FP +EVV I RE++LGGG
Sbjct: 154 VLEGGSIHVDGEGTVITTEECLLNRNRNPHLSREQIEAVLRDHLAVDTVVWLPDGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMDVLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGG 353 HSP 2 Score: 30.0314 bits (66), Expect = 5.566e-62 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHC+TQQQPA
Sbjct: 353 GNIHCLTQQQPA 364
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA1_LISMF (Putative agmatine deiminase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=aguA1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.258e-62 Identity = 118/203 (58.13%), Postives = 152/203 (74.88%), Query Frame = 2
Query: 17 VLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
VLEGGSIHVDGEGT +TTEECLL++ RNP L+K QIE LK YL + KIIWL RG++ D+ TNGH+DN+ + +PGVV L+WTDD+TDPQYE S E ILS+ TDA+GRKL++ K++VP P+ +T+EE+ G++ PR G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LGGG
Sbjct: 153 VLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDE-TNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLRQLYPNCEVVGV-KAREILLGGG 352 HSP 2 Score: 26.5646 bits (57), Expect = 7.258e-62 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 624 GNIHCITQQQP 656
GNIHCITQQ P
Sbjct: 352 GNIHCITQQVP 362
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHESA (Putative agmatine deiminase OS=Shewanella sp. (strain ANA-3) GN=aguA PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.234e-61 Identity = 118/204 (57.84%), Postives = 147/204 (72.06%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+TT ECLLN NRNP L K QIE L+ YL V + IWL G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS AL +L + DA+GRKL+I L PGPLY TEEE+ G+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++++VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTTAECLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQEIFPEHKIVGVP-AREILLGGG 357 HSP 2 Score: 26.5646 bits (57), Expect = 1.234e-61 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ P+
Sbjct: 357 GNIHCITQQIPS 368
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB8 (Putative agmatine deiminase OS=Shewanella baltica (strain OS185) GN=aguA PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.234e-61 Identity = 118/204 (57.84%), Postives = 147/204 (72.06%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE+ L+ YL V + IWL G++ D+ T+GHIDNMCCF++PG V+L WTDD+ DPQY RS AL +L + DA+GRKL+I L PGPLY TEEE+ G+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+YE+VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTSAECLLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDEADPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESLGVT-EGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPTTDDIAAQKLQEIFPEYEIVGVP-AREILLGGG 357 HSP 2 Score: 26.5646 bits (57), Expect = 1.234e-61 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ P+
Sbjct: 357 GNIHCITQQIPS 368
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHESM (Putative agmatine deiminase OS=Shewanella sp. (strain MR-4) GN=aguA PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.098e-61 Identity = 118/204 (57.84%), Postives = 146/204 (71.57%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+TT ECLLN NRNP L K QIE L+ YL V + IWL G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS AL +L + DA+GRKL+I L PGPLY TEEE+ G+ +G PR AG RLA SYVNF I N I+ P D D A + L FP++++VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTTAECLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQDIFPEHKIVGVP-AREILLGGG 357 HSP 2 Score: 26.5646 bits (57), Expect = 2.098e-61 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ P+
Sbjct: 357 GNIHCITQQIPS 368
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHESR (Putative agmatine deiminase OS=Shewanella sp. (strain MR-7) GN=aguA PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.735e-61 Identity = 118/204 (57.84%), Postives = 146/204 (71.57%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+TT ECLLN NRNP L K QIE L+ YL V + IWL G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS AL +L + DA+GRKL+I L PGPLY TEEE+ G+ +G PR AG RLA SYVNF I N I+ P D D A + L FP++++VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTTAECLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDE-TDGHIDNMCCFARPGEVVLHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQDIFPEHKIVGVP-AREILLGGG 357 HSP 2 Score: 26.5646 bits (57), Expect = 2.735e-61 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ P+
Sbjct: 357 GNIHCITQQIPS 368
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHEFN (Putative agmatine deiminase OS=Shewanella frigidimarina (strain NCIMB 400) GN=aguA PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.735e-61 Identity = 117/204 (57.35%), Postives = 145/204 (71.08%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+TT ECLLN NRNP L + QIE L YL V + IWLP G++ D+ T+GHIDN+CCF++PG V+L WTDD++DPQY RS AL IL + DA+GRKL + + PGPLY TEEEA G+ +G PR AG RLA SY NF I N I+ P D D A + L + FP+YE+VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTTAECLLNSNRNPDLTREQIEALLAEYLNVKQFIWLPDGVYMDE-TDGHIDNLCCFARPGEVVLHWTDDQSDPQYPRSKAALDILQNTVDAQGRKLTVHLIPQPGPLYCTEEEAQGV-AEGTGVPRTAGERLAGSYANFLITNNRIVFPLL-DPVTDDIAAQKLQEIFPEYEIVGVP-AREILLGGG 357 HSP 2 Score: 26.5646 bits (57), Expect = 2.735e-61 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ P+
Sbjct: 357 GNIHCITQQIPS 368
BLAST of DC900070 vs. ExPASy Swiss-Prot
Match: AGUA_SHEON (Putative agmatine deiminase OS=Shewanella oneidensis GN=aguA PE=3 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 4.650e-61 Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 2
Query: 14 MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 625
++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE L+ YL V + IWL G++ D+ T+GHIDNMCCF++PG V+L WTDD++DPQY RS AL +L + DA+GRKL+I L PGPLY +EEE+ G+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++E+VG+ AREI+LGGG
Sbjct: 158 LILEGGSIHVDGEGTCMTSAECLLNANRNPELTKEQIEGLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDESDPQYPRSKAALEVLQNTVDAQGRKLKIHLLPQPGPLYCSEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP-AREILLGGG 357 HSP 2 Score: 27.7202 bits (60), Expect = 4.650e-61 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 624 GNIHCITQQQPA 659
GNIHCITQQ PA
Sbjct: 357 GNIHCITQQIPA 368 The following BLAST results are available for this feature:
BLAST of DC900070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900070 ID=DC900070; Name=DC900070; organism=Citrus sinensis; type=EST; length=877bpback to top |