DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 85/145 (58.62%), Postives = 99/145 (68.28%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLRKS    YL WAV +FR+T  GV D+TQIHTHMCYS FN I   I  MDADVI+IE SRS+ +LL V  E   Y   IGPGVYDIHSPR+PS  E+ + + K   V+    LWVNPDCGLKTR + E   +L NMVAAA+ LR
Sbjct:  610 PLRKSAWREYLGWAVDAFRLTASGVADSTQIHTHMCYSEFNHIAEWIAKMDADVISIEASRSNMELLGVL-ESFTYPNDIGPGVYDIHSPRVPSVAEMVELLRKASEVIPLERLWVNPDCGLKTRAWPETLASLRNMVAAAQKLR 753          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 84/145 (57.93%), Postives = 99/145 (68.28%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+ +   YLDWAV SFR+   GV D TQIHTHMCYS FNDII +I  MDADVI+IE +RS  +LL  F  G  Y A IGPGVYDIHSPR+P+ EE+   +      L    LWVNPDCGLKTRK+ E + A+ NMV AA+  R
Sbjct:  632 PLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAF-VGYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNMVEAARRAR 775          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ACTPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 82/149 (55.03%), Postives = 102/149 (68.46%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  609 PLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ACTP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 82/149 (55.03%), Postives = 102/149 (68.46%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  609 PLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 82/149 (55.03%), Postives = 102/149 (68.46%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  609 PLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 83/149 (55.70%), Postives = 102/149 (68.46%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PLR+S+ A YL+WAV +F++     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD  LL  F+E  +Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + +L+NMV AA+ LR Q A
Sbjct:  611 PLRQSDWAAYLNWAVDAFKLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMDLLEAFKE-FEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPAERLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA 758          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_PASMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pasteurella multocida GN=metE PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PL++++   YL WA  +FR++  GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P  EEI   + K L V+    LWVNPDCGLKTR + E    L  M+   K LR +L
Sbjct:  610 PLKRADWDAYLQWAGEAFRLSYMGVQDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFGD-FKYPNDIGPGVYDIHSPRVPKAEEIERLLRKALNVVPKERLWVNPDCGLKTRGWPETIAQLEVMMEVTKKLRAEL 756          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 83/145 (57.24%), Postives = 100/145 (68.97%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PL +S+   YL+WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E +   + K    + T  LWVNPDCGLKTR +TE + AL+NMV AA+ LR
Sbjct:  609 PLHQSDWGAYLEWAVDAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPGVYDIHSPNVPSVEWVEALLLKAAQRIPTERLWVNPDCGLKTRGWTETRQALANMVKAAQNLR 752          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ALCBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=metE PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 84/145 (57.93%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+ E   YLDWAV  FR+    V D TQIHTHMCYS FNDII +I  +DADVITIE SRS+ +LL  FR+   Y   IGPGVYDIHSP  P    +   + K    L    LWVNPDCGLKTRK+ E + AL+NMV AAK LR
Sbjct:  617 PLRQEEWTQYLDWAVDCFRLATVSVDDDTQIHTHMCYSEFNDIIEAIAALDADVITIETSRSNMELLDAFRD-FHYPNDIGPGVYDIHSPNEPDVAWMVQLMEKAAERLPKERLWVNPDCGLKTRKWDETRAALANMVNAAKQLR 760          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.836e-39
Identity = 83/145 (57.24%), Postives = 98/145 (67.59%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+ E   YLDWAV +F++     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR +TE + +L+NMV AAK LR
Sbjct:  611 PLRREEWQSYLDWAVEAFKLNAAIAKDDTQIHTHMCYCEFNDIMPSIAALDADVITIETSRSDMELLDSF-ENFSYPNEIGPGVYDIHSPNVPSVEWIEALLRKAADRIPVERLWVNPDCGLKTRGWTETRQSLANMVQAAKRLR 754          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_PELCD1.663e-3958.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR1.663e-3957.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTPJ1.663e-3955.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP71.663e-3955.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP21.663e-3955.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP52.172e-3955.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PASMU2.172e-3955.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT92.172e-3957.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALCBS2.172e-3957.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL2.836e-3957.245-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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