DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  614 PLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDLN-AIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  614 PLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDLN-AIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  614 PLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDLN-AIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  614 PLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDLN-AIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LACPL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactobacillus plantarum GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 453
            PL++     YLD AV+SF+IT  GVQ+ TQIHTHMCYSNF DII++I  +DADVI+IE SRS  +++S F E   Y   IG GVYDIHSPR+PS  EI   I + L V++    W+NPDCGLKTR+ +E   AL NM+AA   ++ QL ++
Sbjct:  617 PLKQRHWQAYLDEAVYSFKITTTGVQNDTQIHTHMCYSNFADIINTIKALDADVISIETSRSHGEIISAF-EQTGYDQEIGLGVYDIHSPRVPSVAEIEANIQRALRVIDARQFWINPDCGLKTRQESETLAALKNMIAARNAIQAQLTTS 766
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CAMJR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni (strain RM1221) GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +  +++   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  607 PLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK-AIRFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASLKNLVTATQKIREQL 754
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CAMJE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +  +++   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  607 PLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK-AIRFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVITSLKNLVTATQKIREQL 754
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CAMJ8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=metE PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +  +++   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  607 PLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK-AIRFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASLKNLVTATQKIREQL 754
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.319e-39
Identity = 81/150 (54.00%), Postives = 102/150 (68.00%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYG--AGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR +EHA YL+WA  SFRI   GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS    + V RE   +G     GPGVYDIHSPRIP  EE A  + K L  +    LWVNPDCGLKTR + E + +L N+VAAA+ +R +L
Sbjct:  623 PLRAAEHAAYLEWATESFRIATSGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARSH---MQVARELAAHGYPREAGPGVYDIHSPRIPGAEEAAALLRKGLEAIPAERLWVNPDCGLKTRGWPETRASLENLVAAARQIRAEL 769
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_HERA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=metE PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.319e-39
Identity = 81/149 (54.36%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PLR+++   YLDWAV +FRI     + +TQIHTHMCYS+FNDII +I  +DADVI+IE++RS   LL+   EG +Y   IGPGVYDIHSP IP+ E++  R+ ++L  L    LW+NPDCGLKTR Y EV  AL  MV A K +R Q++
Sbjct:  602 PLRRNDWQNYLDWAVRAFRIATSDAKPSTQIHTHMCYSDFNDIIAAIAALDADVISIEDARSAGSLLAGL-EG-RYTQQIGPGVYDIHSPNIPTVEQLVARMRQLLNYLPAEQLWINPDCGLKTRTYAEVAAALQAMVTATKQVRNQIS 748
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_MYCTU4.838e-3953.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA4.838e-3953.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP4.838e-3953.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO4.838e-3953.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACPL4.838e-3953.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJR4.838e-3953.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJE4.838e-3953.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJ84.838e-3953.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG6.319e-3954.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HERA26.319e-3954.365-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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