DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CITK8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metE PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.319e-39
Identity = 83/145 (57.24%), Postives = 98/145 (67.59%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E I   +NK    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPGVYDIHSPNVPSVEWIEALLNKAAQRIPAERLWVNPDCGLKTRGWPETRAALANMVKAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CAMJJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=metE PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.319e-39
Identity = 79/149 (53.02%), Postives = 104/149 (69.80%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F DI+  I  MDADVI+ E SRS+  LL   +  +++   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  607 PLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFGDILKEIDAMDADVISFEASRSNLSLLDTLK-AIRFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASLKNLVTATQKIREQL 754          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.253e-39
Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +  V +   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  607 PLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK-AVHFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASLKNLVTATQKIRKQL 754          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BUCAI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metE PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.253e-39
Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 456
            PLRKS    YL WAV  FR++  GV++TTQIHTHMCY  FNDI+ SI  +DADVITIE +RSD +LL  F++  KY   +GPG YDIHS  IPS + I   +NK +  +    +WVNPDCGLKTR + E   +L NMV A K+LR ++  ++
Sbjct:  606 PLRKSSWHEYLSWAVDVFRLSASGVKNTTQIHTHMCYCEFNDIMDSIALLDADVITIEAARSDMELLESFKK-FKYPNEVGPGAYDIHSSNIPSVQSIISLLNKAMKYIPLKRIWVNPDCGLKTRNWNETILSLKNMVEATKILREKMKDSE 756          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SODGM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Sodalis glossinidius (strain morsitans) GN=metE PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.078e-38
Identity = 81/147 (55.10%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL+ S    YL WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F+E   Y   IGPGVYDIHSP +PS E I + + K    +    LWVNPDCGLKTR + E + +L+NMV AA+ LR +
Sbjct:  611 PLKHSAWQDYLTWAVEAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLETFKE-FDYPNEIGPGVYDIHSPNVPSEEWIVELLRKAAQRIPAERLWVNPDCGLKTRAWPETRQSLANMVTAARKLREE 756          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BACA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metE PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.078e-38
Identity = 83/149 (55.70%), Postives = 100/149 (67.11%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PL+  +   YL WA  +FR+T   VQ+ TQIHTHMCYSNF DI+ +I D+DADVITIE+SRS    L   +E   Y  G+G GVYDIHSPR+P+TEEI   I+  L V  T+  WVNPDCGLKTR+  E   AL NMV AAK  R + A
Sbjct:  612 PLKTQDWDEYLTWAAEAFRLTTSSVQNETQIHTHMCYSNFEDIVDTINDLDADVITIEHSRSHGGFLEYLKEH-PYVKGLGLGVYDIHSPRVPATEEIYQIIDDALEVCPTDRFWVNPDCGLKTRQQEETVAALKNMVDAAKQARKKQA 759          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SALPK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=metE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.839e-38
Identity = 82/145 (56.55%), Postives = 97/145 (66.90%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL+W V +FRI     +D TQIHTHMCY  FNDI+ SI+ +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA  LR
Sbjct:  608 PLRRSDWDAYLEWGVEAFRINAAVAKDETQIHTHMCYCEFNDIMDSIVALDADVITIETSRSDMELLESF-EAFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPAQRLWVNPDCGLKTRGWPETRAALANMVKAAHNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SALPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A GN=metE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.839e-38
Identity = 82/145 (56.55%), Postives = 97/145 (66.90%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL+W V +FRI     +D TQIHTHMCY  FNDI+ SI+ +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA  LR
Sbjct:  608 PLRRSDWDAYLEWGVEAFRINAAVAKDETQIHTHMCYCEFNDIMDSIVALDADVITIETSRSDMELLESF-EAFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPAQRLWVNPDCGLKTRGWPETRAALANMVKAAHNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BURTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.839e-38
Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 453
            PL+  + A YLDWAV +FRI   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E  +Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R  +  A
Sbjct:  612 PLKARDRAEYLDWAVRAFRIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFEYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQTVEQA 761          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_DESVH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.401e-38
Identity = 80/148 (54.05%), Postives = 104/148 (70.27%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR++    YLD AV +FR+   GV D TQ+HTHMCY +F+DII  I  MDADVI++E SRS  +LL VF     Y   +GPGVYDIHSPR+PS +E+   + +  AVL  + LWVNPDCGLKTR++ E + AL+NMV AA+ +R +L
Sbjct:  637 PLRRAAQEAYLDAAVRAFRLATSGVADATQLHTHMCYCDFHDIIDRIAGMDADVISLEASRSRMELLDVFATH-GYPNEVGPGVYDIHSPRVPSVDEMEALLLRAAAVLPVDRLWVNPDCGLKTREWPETRAALANMVEAARRVRARL 783          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_CITK86.319e-3957.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJJ6.319e-3953.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD8.253e-3953.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAI8.253e-3952.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SODGM1.078e-3855.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACA21.078e-3855.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPK1.839e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPA1.839e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURTA1.839e-3854.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVH2.401e-3854.055-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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