DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ECO8A (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O8 (strain IAI1) GN=metE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ECO5E (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ECO57 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 GN=metE PE=3 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ECO24 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STAHJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.986e-38
Identity = 80/145 (55.17%), Postives = 100/145 (68.97%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR   H  YL  AV+SF++    VQD TQIHTHMCYS F  IIH+I ++DADVI+IE SRS   L+  F E + Y  GIG GVYDIHSPRIP+ +EIA  I++ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V   +  R
Sbjct:  597 PLRSEYHEQYLADAVNSFKLATSSVQDETQIHTHMCYSQFGQIIHAIHELDADVISIETSRSHGDLIKDF-EDINYDLGIGLGVYDIHSPRIPTEDEIATAIDRSLQQIDRSLFWVNPDCGLKTRKEDEVKDALTVLVNTVRKKR 740          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SALAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.986e-38
Identity = 82/145 (56.55%), Postives = 95/145 (65.52%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA  LR
Sbjct:  608 PLRRSDWDAYLAWGVEAFRINAAAAKDETQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EAFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPAQRLWVNPDCGLKTRGWPETRAALANMVKAAHNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.124e-38
Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLKRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EAFEYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPVERLWVNPDCGLKTRGWPETRAALANMVQAARNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.124e-38
Identity = 82/148 (55.41%), Postives = 100/148 (67.57%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++
Sbjct:  612 PLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKV 758          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_ECO8A5.349e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO7I5.349e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO5E5.349e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO575.349e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO455.349e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO245.349e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAHJ6.986e-3855.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALAR6.986e-3856.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP79.124e-3855.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS9.124e-3855.415-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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