DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.192e-37
Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTRK  E   AL +M+ A K +R +
Sbjct:  614 PLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE-VTYDKEIGLGVYDIHSPRVPTVSEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAE 759
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BACLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.192e-37
Identity = 81/149 (54.36%), Postives = 101/149 (67.79%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 447
            PL++ +   YL WA  +FR++   V+DTTQIHTHMCYSNF DI+ +I D+DADVITIE+SRS    L  + E   Y  G+G GVYDIHSPR+PS++E+   I   L V   +  WVNPDCGLKTR+  E   AL NMV AAK  R +LA
Sbjct:  612 PLKERDWDEYLKWAAEAFRLSTSSVEDTTQIHTHMCYSNFEDIVDAIEDLDADVITIEHSRSHGGFLD-YLEQHPYLKGLGLGVYDIHSPRVPSSDEMLTIIEDALKVCPADRFWVNPDCGLKTRQPEETIAALKNMVEAAKQARGKLA 759
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  611 PLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756
[Close]
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 1 
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTRK  E   AL +M+ A K +R +
Sbjct:  614 PLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE-VTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAE 759
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_LISIN1.192e-3752.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACLD1.192e-3754.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPS1.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP1.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN1.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE1.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA1.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP31.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE81.556e-3754.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMF1.556e-3752.385-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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