DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_TRIEI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=metE PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.238e-35
Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL++     YL+WAV +FR++    +  TQ+HTHMCYS F DI+ SI  +DADVI+IE+SRS+ + L    +   Y A +GPGVYD+HSP IP+TE + + + K +  L    +WVNPDCGLKTR++ E  PA  NMV AA  LR +
Sbjct:  599 PLKQQRWHEYLNWAVDAFRLSTAIARPETQVHTHMCYSEFGDIMESIKQLDADVISIEDSRSNNETLMQLTDA-DYPAQVGPGVYDVHSPSIPTTEYLRESLYKCIQYLPVTQIWVNPDCGLKTRRWEEAIPATRNMVQAAISLRQE 744          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.442e-35
Identity = 74/149 (49.66%), Postives = 102/149 (68.46%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ ++ YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+  +L   +    +   +GPGVYDIHSPR+P+ +EIA  I  +LA +    +W+NPDCGLKTR  +E K +L ++  AAK  R +L
Sbjct:  602 PLRRSDWYSEYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLVILDELK-AKNFQTQVGPGVYDIHSPRVPAVDEIAHTIQAILAKVPKEKVWINPDCGLKTRGESETKASLIHLTQAAKAARKEL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.747e-34
Identity = 74/149 (49.66%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI + I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R +L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVASDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDNTIEAILAKVPSKKVWINPDCGLKTRGIPETKESLIRLVEAAKAAREKL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LACLM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metE PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.747e-34
Identity = 75/146 (51.37%), Postives = 101/146 (69.18%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+ ++ YLDWA+ +FR+ +  V+  TQIHTHMCYS F DII SI  MDADVI+ E SRS   ++   +    +   +GPGVYDIHSPRIPS++EI  ++ K+L  L    +WVNPDCGLKTR   E  P+L+++V A K +R
Sbjct:  605 PLRRSDWYSEYLDWAIPAFRLVHSKVKAETQIHTHMCYSEFEDIIPSIDAMDADVISFEASRSQLSIIDALKAH-HFQTLVGPGVYDIHSPRIPSSQEIKIQLEKILNKLPIEQVWVNPDCGLKTRGNKETIPSLTHLVEATKEVR 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRR6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metE PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.588e-34
Identity = 74/149 (49.66%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI + I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R +L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDNTIEAILAKVPSKKVWINPDCGLKTRGIPETKESLIRLVEAAKAAREKL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.588e-34
Identity = 74/149 (49.66%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI + I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R +L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDNTIEAILAKVPSKKVWINPDCGLKTRGIPETKESLIRLVEAAKAAREKL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metE PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.588e-34
Identity = 74/149 (49.66%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI + I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R +L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDNTIEAILAKVPSKKVWINPDCGLKTRGIPETKESLIRLVEAAKAAREKL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LACLS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metE PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.686e-34
Identity = 74/148 (50.00%), Postives = 102/148 (68.92%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+S+ ++ YLDW++ +FR+ +  V+  TQIHTHMCYS F DII SI  MDADVI+ E SRS   ++   +    +   +GPGVYDIHSPRIPS++EI  ++ K+L  L    +WVNPDCGLKTR   E  P+L+++V A K +R +
Sbjct:  605 PLRRSDWYSEYLDWSIPAFRLVHSKVKAETQIHTHMCYSEFEDIIPSIDAMDADVISFEASRSQLSIIDALKAH-HFQTLVGPGVYDIHSPRIPSSQEIKIQLEKILNKLPIEQVWVNPDCGLKTRGNKETIPSLTHLVEATKEVRKE 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_THEEB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=metE PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34
Identity = 72/153 (47.06%), Postives = 98/153 (64.05%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSD-EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 456
            PL+      YL WAV +FR+     +  TQIHTHMCYS F DII  I  +DADV++IENSRS+ E L  +   G ++  G+G  VYD+HSP +PS E++  ++   +A L    +WVNPDCGLKTR + EV P+L NMV A K +R ++  +K
Sbjct:  605 PLKAERWNEYLSWAVDAFRLAAGVAKPETQIHTHMCYSEFGDIIEHIERLDADVLSIENSRSNNETLFQITDAGYRHQVGVG--VYDVHSPAVPSVEQLVQQLRTSVANLAPEQIWVNPDCGLKTRHWEEVIPSLKNMVEATKTIRQEVMQSK 755          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34
Identity = 74/149 (49.66%), Postives = 99/149 (66.44%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI   I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R  L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDHTIEAILAKVPSKKVWINPDCGLKTRGIPETKASLVRLVEAAKAARQHL 749          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_TRIEI4.238e-3548.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSY9.442e-3549.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP42.747e-3449.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLM2.747e-3451.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRR63.588e-3449.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI3.588e-3449.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP23.588e-3449.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLS4.686e-3450.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEEB7.993e-3447.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV7.993e-3449.665-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
back to top