DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34
Identity = 73/149 (48.99%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E +RS+ ++L   +    +   +GPGVYDIHSPR+P+  EI + I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R +L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEANRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDNTIEAILAKVPSKKVWINPDCGLKTRGIPETKESLIRLVEAAKAAREKL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34
Identity = 74/149 (49.66%), Postives = 99/149 (66.44%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI   I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R  L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDHTIEAILAKVPSKKVWINPDCGLKTRGIPETKASLVRLVEAAKAARQHL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.781e-33
Identity = 72/149 (48.32%), Postives = 100/149 (67.11%), Query Frame = 1
Query:    1 PLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I ++DADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P   EI   I  +LA + ++ +W+NPDCGLKTR   E K +L+ ++ AAK  R  L
Sbjct:  602 PLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNLDADVISFEASRSNLEILDELK-AQNFQTEVGPGVYDIHSPRVPQDGEIDHTIEAILAKVPSSKVWINPDCGLKTRGIKETKESLTKLLEAAKAARKNL 749          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_THESQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga sp. (strain RQ2) GN=metE PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.037e-33
Identity = 68/150 (45.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 450
            P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F     +   IG GV+DIHSP +PS  E+ + + ++L VL   ++W+NPDCGLKTR + EV P+L NMVA AK +R +  S
Sbjct:  586 PIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLRNMVALAKEMREKFES 734          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_THEMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga maritima GN=metE PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.037e-33
Identity = 68/150 (45.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 450
            P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F     +   IG GV+DIHSP +PS  E+ + + ++L VL   ++W+NPDCGLKTR + EV P+L NMVA AK +R +  S
Sbjct:  586 PIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLRNMVALAKEMREKFES 734          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_THEP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metE PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.181e-33
Identity = 68/147 (46.26%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F     +   IG GV+DIHSP +PS +E+   I ++L +L   ++WVNPDCGLKTR + EV P+L NMV  AK LR +
Sbjct:  586 PVKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSVDEMKSIIERVLRILPKELIWVNPDCGLKTRNWEEVVPSLKNMVDLAKKLRKE 731          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CHLRE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.728e-32
Identity = 79/167 (47.31%), Postives = 99/167 (59.28%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKML--AVLETNI--LWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT--QLASAK*VVLEIGGI 483
            PL     A YL WAV +FR+        TQ+ TH+CYS+F DI+ +I  MDADV+TIENSRSD+ +++       YG  IGPGVYD+HSP +PS E I  RI   +   +L      +WVNPDCGLKTR + E   AL+NMV AA   R   QLA    V    GG+
Sbjct:  622 PLNGERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSDFQDILPAIDRMDADVLTIENSRSDKPMMAAL-AAAGYGRDIGPGVYDVHSPVVPSVEFIKSRIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALANMVEAAAQARAELQLAGGAAVAPVTGGV 787          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.843e-31
Identity = 71/148 (47.97%), Postives = 99/148 (66.89%), Query Frame = 1
Query:    1 PLRKS-EHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR   E + YL+WA  SFR+   GV+++TQIH+H CYS+ +   + I  +DADV++IE S+ D+   +  +E  +Y   IG G++DIHSPRIPS +E   RI ++L V   +  WVNPDCGLKTR + EVK +L+NMV AAK  R +
Sbjct:  623 PLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDDP--NYIQEFSEYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPEVKESLTNMVEAAKEFRAK 766          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 120.939 bits (302), Expect = 5.548e-27
Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 1
Query:    1 PLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PLR+ +E + Y  WA  +FR+   GV + TQIH+H CYS+ +   + I  +DADV++IE S+ D+   +   E   Y   IG G++DIHSPRIPS +E   +I+ +L        WVNPDCGLKTR + E + +L++MV AAK  R Q
Sbjct:  621 PLREGTERSAYYTWAAEAFRVATSGVANKTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDDA--NYIAEFKNYPNHIGLGLFDIHSPRIPSKDEFIAKISTILKSYPAEKFWVNPDCGLKTRGWEETRLSLTHMVEAAKYFREQ 764          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SULTO (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus tokodaii GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 39/142 (27.46%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   19 HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            H   ++WA+ +   +  G+    ++  H+CY  ++ +   +  ++ D I +     + + + +F+   K+   IG GV D+H+ RI + EE+A+ +  +L   +  ++WVNPDCGLK          L NMV   K++R +L
Sbjct:  186 HKNEVEWAIEAVNESIKGIN--VKVVMHVCYGEYSYLEPYLDKLNVDQINLALKNYNYEPVKLFK---KWDREIGVGVIDVHNKRIETPEEVANDLKMLLDYFKPEMIWVNPDCGLKLLPRKIAFQKLLNMVKGTKIVREEL 322          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_STRPN7.993e-3448.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC7.993e-3449.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD1.781e-3348.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THESQ3.037e-3345.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEMA3.037e-3345.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEP15.181e-3346.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHLRE5.728e-3247.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL2.843e-3147.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST5.548e-2743.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SULTO2.956e-1227.46Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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