DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DC900064_ssr40 microsatellite DC900064_ssr40:40..51. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:32..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRMU (Adenylate kinase OS=Streptococcus mutans GN=adk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.209e-20
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAV---TKIEPEFVLFFD----CSEEEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E GT+ ++ I +G++VP EVT  ++++ + ES   K  FL+DG+PR  E   A + +     ++ + V+  D    C  E +  RI+NR  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEKFGLAHISTGDMFRAAMANQTEMGTLAKSFIDKGELVPDEVTNGIVKERLSESDITKKGFLLDGYPRTIEQAHALDEILSKLNLKLDGVINIDVDPACLVERLSGRIINRKTGETYHKVFNPPADYNEDDYYQREDDKPETVK 165          

HSP 2 Score: 28.1054 bits (61), Expect = 3.209e-20
Identity = 12/42 (28.57%), Postives = 22/42 (52.38%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 711
            +R  V +    P+++YY  KG V  I+  + +  VF+ +  V
Sbjct:  166 RRLDVNIAQGHPIIEYYRNKGLVYDIEGNQDINLVFETIAKV 207          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PARL1 (Adenylate kinase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.196e-19
Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCS--EEEMERRILNRNQG-REDDNVETI 581
            LG PG+GKGTQ   + E  G   LS GD+LRA +  GSE G + + ++  G++VP +V + ++   +E+    + +++DGFPRN     A + +     T ++    L  D S   + +E R      G R DDN E +
Sbjct:    6 LGPPGAGKGTQAKRLEEAHGLVQLSTGDMLRAAVAQGSEVGKVAEGIMARGELVPDDVVVGIIADRIEQPDAVNGYILDGFPRNVAQAEALDKMLAGKGTTLDAVVELGVDDSILLKRIETRAAETAGGPRADDNAEAL 144          

HSP 2 Score: 43.8986 bits (102), Expect = 1.196e-19
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 711
            L KR KV+ E + P++ YY+AKGK+R +D  K + EV   ++ V
Sbjct:  144 LAKRLKVYHEQTAPLIAYYKAKGKLRTVDGMKSMDEVTGQIETV 187          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PARD8 (Adenylate kinase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=adk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.199e-19
Identity = 50/136 (36.76%), Postives = 81/136 (59.56%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIR 584
            G PGSGKGTQ   I++ +G  H+S GD+LR E+K+ +E G + ++ I++G++VP E+ + +L   ++     K +I DGFPR      A + +      +   +L     EEE+ +R+L R +  GR DDN+ETI+
Sbjct:    8 GAPGSGKGTQSELIIKEYGLDHISTGDVLRGEMKAETELGKIAKDYIEKGQLVPDELIVDMLANVLDSKKPAKGVIFDGFPRTIPQAKALKKMLNERGTDVSVMLNLQVEEEELIKRLLERGKVSGRSDDNLETIK 143          

HSP 2 Score: 26.1794 bits (56), Expect = 1.199e-19
Identity = 12/45 (26.67%), Postives = 20/45 (44.44%), Query Frame = 1
Query:  571 LRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 705
            L  +  R  V+   + P+  YY  +GK   I     + E+F  +K
Sbjct:  139 LETIKSRLDVYHTQTAPLADYYVGEGKHVAIKGMGTIEEIFGRIK 183          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_NATPD (Adenylate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=adk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.023e-19
Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNV 572
            LG PG+GKGTQ +NIV+ +G  H++ GD LRA     +E+GT  +  ++ G++VP  V  +++Q A++E+  D F++DG+PRN         +T +  + V   D   +E+  R+  R    E  ++
Sbjct:    9 LGAPGAGKGTQSSNIVDEYGVDHITTGDALRANKDMETEHGTP-REFMEAGELVPDPVVNEIVQAAIDEA--DGFVLDGYPRNLSQAEYLSDITDV--DVVALLDVGRDELVDRLTGRRMDPETGDI 130          

HSP 2 Score: 35.4242 bits (80), Expect = 2.023e-19
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 1
Query:  568 TLRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 708
            T   + +R  VF E++ PV+ YYE +G++ +ID      EV+D ++A
Sbjct:  154 TEETVNERLDVFDENTQPVIDYYEDEGELVRIDGEASPDEVWDDLQA 200          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_AZOPC (Adenylate kinase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.639e-19
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQ--GREDDNVETIR 584
            G PGSGKGTQ   I E +    +S G++LR EIK  +E G + +  I +G+++P  +TI++L    ++  N+K ++ DGFPR      A + + K +      V      E+E+ RR+L R +   R+DDN+ETI+
Sbjct:    8 GAPGSGKGTQSELISEKYSLYPISTGEILRREIKDKTELGKIAEEYINQGQLLPDYLTIRILVDLFDKVDNNKGYIFDGFPRTISQAKALDDLLKEQNTSIAIVFSLSVDEKELIRRLLKRGKLFSRKDDNLETIQ 143          

HSP 2 Score: 30.8018 bits (68), Expect = 2.639e-19
Identity = 15/44 (34.09%), Postives = 23/44 (52.27%), Query Frame = 1
Query:  571 LRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            L  +  R  V+ E +  V +YY  KGK+ +I     V EVF+ +
Sbjct:  139 LETIQNRLTVYREQTESVQEYYRKKGKLMEIIGKNSVEEVFENI 182          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_CAEBR (Adenylate kinase 2, mitochondrial OS=Caenorhabditis briggsae GN=let-754 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 3.398e-19
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            +G PGSGKGTQ       +   HL+ GDLLRAE+ SGSE G  ++  +  GK+V  +V  KL+++ +E+      F++DGFPR        + +    K   + V+ F+ +++ + RRI  R
Sbjct:   43 IGPPGSGKGTQAPAFASKYFSCHLATGDLLRAEVASGSEFGKQLKATMDAGKLVSDDVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGR 164          

HSP 2 Score: 39.6614 bits (91), Expect = 3.398e-19
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV---FDAVKAVFTPK 723
            L KR   + + ++P+V YY+  G   K+DAAKP+A+V    D+V A FT K
Sbjct:  205 LRKRLVQYHQMTVPLVDYYQKHGVHVKVDAAKPMADVKAHIDSVFAKFTQK 255          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_DROMO (Adenylate kinase 2, mitochondrial OS=Drosophila mojavensis GN=Adk2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.427e-19
Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++ EGK+V  ++ + ++   +++    + FL+DGFPR        +++    K   + V+ F   +  + RRI  R
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIASGSKLGAELKKVMDEGKLVSDDLVVDMIDSNLDKPECKNGFLLDGFPRTVVQAQKLDSLLDKRKTSLDAVIEFAIDDNLLVRRITGR 145          

HSP 2 Score: 38.1206 bits (87), Expect = 4.427e-19
Identity = 16/45 (35.56%), Postives = 28/45 (62.22%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 714
            L KR + + + + P+V YY  +G   K+DAAK  ++VF  + ++F
Sbjct:  186 LKKRLEAYHKQTKPLVDYYGLRGLHFKVDAAKKASDVFSTIDSIF 230          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRM5 (Adenylate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.466e-19
Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRE 587
            LG PGSGKGTQ   + E  G  H+S GD+LRAEI +GSE G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN     A +  + KI +P + V+  D + E +  RI  R   QGR DD+ E +R+
Sbjct:    6 LGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGSELGKQAKAVMDAGNLVSDDILLGMLESRLTQADVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVDRIAGRAKEQGRADDSPEAVRQ 143          

HSP 2 Score: 28.8758 bits (63), Expect = 4.466e-19
Identity = 10/35 (28.57%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 690
            +R +V+ + + PVV +Y A+G + ++D    + E+
Sbjct:  143 QRLQVYNDQTAPVVDFYAARGTLARVDGVGELDEI 177          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_NITSB (Adenylate kinase OS=Nitratiruptor sp. (strain SB155-2) GN=adk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.801e-19
Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFG--YTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEP----EFVLFFDCSEEEMERRILNRNQGREDDNVE 575
            +G PGSGK T    I +       H S GDLLR E+K G+  G  I + I  G++VP E+ +  ++ A+  S  +  +IDGFPR+ E   A + + +  P    E V+    SEE    R+L R +G  DDNVE
Sbjct:    8 IGAPGSGKTTDAEIIAKKHSDLIAHYSTGDLLREEVKKGTPLGATIASFIDNGQLVPLEIVMDTIKNAILNSDKEVIIIDGFPRSVEQMEALDKMLQENPSIKLEAVIEVVVSEETARERVLGRARG-ADDNVE 140          

HSP 2 Score: 32.7278 bits (73), Expect = 5.801e-19
Identity = 16/50 (32.00%), Postives = 29/50 (58.00%), Query Frame = 1
Query:  589 RFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK-DEKA 735
            R K++LE    + ++YE KG ++KID  + + E+   +++    K DE A
Sbjct:  145 RMKLYLEPLNQIEEFYEKKGLLKKIDGERTIEEIVADMESFILQKIDENA 194          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_CAEEL (Adenylate kinase 2, mitochondrial OS=Caenorhabditis elegans GN=let-754 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.479e-19
Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            +G PGSGKGTQ     + +   HL+ GDLLRAE+ SGSE G  ++  +  GK+V  EV  KL+++ +E+      F++DGFPR        + +    K   + V+ F+ +++ + RRI  R
Sbjct:   32 IGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLVSDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGR 153          

HSP 2 Score: 37.3502 bits (85), Expect = 7.479e-19
Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV---FDAVKAVFTPKDEKAA 738
            L KR   + + ++P+V YY+  G    +DAAKP+ +V    D V A FT K E+ +
Sbjct:  194 LRKRLVQYHQMTVPLVDYYKKHGVHVAVDAAKPMTDVKAHIDQVFAKFTQKKERVS 249          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_STRMU3.209e-2035.00Adenylate kinase OS=Streptococcus mutans GN=adk PE... [more]
KAD_PARL11.196e-1933.09Adenylate kinase OS=Parvibaculum lavamentivorans (... [more]
KAD_PARD81.199e-1936.76Adenylate kinase OS=Parabacteroides distasonis (st... [more]
KAD_NATPD2.023e-1933.86Adenylate kinase OS=Natronomonas pharaonis (strain... [more]
KAD_AZOPC2.639e-1936.03Adenylate kinase OS=Azobacteroides pseudotrichonym... [more]
KAD2_CAEBR3.398e-1935.25Adenylate kinase 2, mitochondrial OS=Caenorhabditi... [more]
KAD2_DROMO4.427e-1936.07Adenylate kinase 2, mitochondrial OS=Drosophila mo... [more]
KAD_STRM54.466e-1937.68Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_NITSB5.801e-1937.31Adenylate kinase OS=Nitratiruptor sp. (strain SB15... [more]
KAD2_CAEEL7.479e-1936.07Adenylate kinase 2, mitochondrial OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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