DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DC900064_ssr40 microsatellite DC900064_ssr40:40..51. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:32..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_DROER (Adenylate kinase 2, mitochondrial OS=Drosophila erecta GN=Adk2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.487e-19
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDNLLVRRITGR 145          

HSP 2 Score: 38.5058 bits (88), Expect = 7.487e-19
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 723
            L KR + + + + P+V YY  +G   K+DAAK  ++VF A+  +F  K
Sbjct:  186 LKKRLEAYHKQTRPLVDYYGLRGLHFKVDAAKKSSDVFSAIDNIFQRK 233          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_THEFY (Adenylate kinase OS=Thermobifida fusca (strain YX) GN=adk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.549e-19
Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRN---EENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIR 584
            +G PG+GKGTQ   +        +S GD+ RA +  G+E G   Q  +  G +VP E+T  +++ +  E+     FL+DGFPRN    E      A   ++ + VL     EEE+ RR+  R +   R DDN ETIR
Sbjct:    6 VGPPGAGKGTQAQILASKLSIPKVSTGDIFRANVSGGTELGKKAQAYMDRGDLVPDEITNAMVRDRLAEDDARAGFLLDGFPRNLAQAETLDEMLADLGVKLDVVLELVVDEEEVIRRLAERARIDNRSDDNEETIR 142          

HSP 2 Score: 35.8094 bits (81), Expect = 7.549e-19
Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  589 RFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 690
            R  V+ E + P+V +YE +G + KIDA  P+ EV
Sbjct:  144 RLVVYREQTAPLVSFYEKRGLLEKIDAVGPIEEV 177          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PORGI (Adenylate kinase OS=Porphyromonas gingivalis GN=adk PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.298e-19
Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            G PGSGKGTQ   ++  +G+ H+S G+LLRAEIK+ +E G      I EG +VP  + + +++K +      +  + DGFPR      A E +      + + VL     EE +  R+LNR +  GR DDN+ETIR+
Sbjct:    8 GAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKVSGRSDDNIETIRK 144          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PORG3 (Adenylate kinase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=adk PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.298e-19
Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            G PGSGKGTQ   ++  +G+ H+S G+LLRAEIK+ +E G      I EG +VP  + + +++K +      +  + DGFPR      A E +      + + VL     EE +  R+LNR +  GR DDN+ETIR+
Sbjct:    8 GAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKISGRSDDNIETIRK 144          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACTN (Adenylate kinase OS=Bacteroides thetaiotaomicron GN=adk PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.298e-19
Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPE------FVLFFDCSEEEMERRILNR--NQGREDDNVETIRE 587
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ I +L    +   + K +I DGFPR     A  EA+ K+  E       +L  +  E+E+  R++ R  + GR DDN ETI++
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMIDILASVFDSFKDSKGVIFDGFPR---TIAQAEALKKMLAERGQDVSVMLDLEVPEDELMVRLIKRGKDSGRADDNEETIKK 144          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_DROYA (Adenylate kinase 2, mitochondrial OS=Drosophila yakuba GN=Adk2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.737e-19
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGR 145          

HSP 2 Score: 38.1206 bits (87), Expect = 9.737e-19
Identity = 17/48 (35.42%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 723
            L KR + + + + P+V YY  +G   K+DAAK  ++VF  + ++F  K
Sbjct:  186 LKKRLEAYHKQTKPLVDYYGLRGLHFKVDAAKKSSDVFSTIDSIFQNK 233          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_DROSI (Adenylate kinase 2, mitochondrial OS=Drosophila simulans GN=Adk2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.737e-19
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGR 145          

HSP 2 Score: 38.1206 bits (87), Expect = 9.737e-19
Identity = 17/48 (35.42%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 723
            L KR + + + + P+V YY  +G   K+DAAK  ++VF  + ++F  K
Sbjct:  186 LKKRLEAYHKQTKPLVDYYGLRGLHFKVDAAKKSSDVFSTIDSIFQRK 233          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_DROSE (Adenylate kinase 2, mitochondrial OS=Drosophila sechellia GN=Adk2-1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.737e-19
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGR 145          

HSP 2 Score: 38.1206 bits (87), Expect = 9.737e-19
Identity = 17/48 (35.42%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 723
            L KR + + + + P+V YY  +G   K+DAAK  ++VF  + ++F  K
Sbjct:  186 LKKRLEAYHKQTKPLVDYYGLRGLHFKVDAAKKSSDVFSTIDSIFQRK 233          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRCO (Adenylate kinase OS=Streptomyces coelicolor GN=adk PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 9.770e-19
Identity = 46/128 (35.94%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQGRED 563
            +G PG+GKGTQ   + E     H+S GDL RA I   +E G + ++ +  G +VP EVTI + +  ME+      FL+DGFPRN     A + + + E    + VL  +  E+E+ +RI  R   R +
Sbjct:    6 VGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMNAGNLVPDEVTIAMAKDRMEQPDAEGGFLLDGFPRNVSQAEALDELLETEGMKLDAVLDLEAPEDEVVKRIAGRRVCRNE 133          

HSP 2 Score: 31.5722 bits (70), Expect = 9.770e-19
Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 690
            KR +V+   + P++ YY+++G V  I A  PV EV
Sbjct:  171 KRLEVYHTQTEPIIDYYKSQGLVATIAATGPVDEV 205          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SYNJA (Adenylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.812e-19
Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETI 581
            LG PG+GKGTQ   +   +    +S GDLLRAE+K+ +  G   +  +  G++VP EV I +++  ++ S    +++DGFPR      A E + +    + + VL  +  ++ +  R+L R   QGR DD  E +
Sbjct:    7 LGPPGAGKGTQAERLAAIYHTPKISTGDLLRAEVKAQTPLGCQAKVYMDAGELVPDEVLIGMVKGQLQHSPAQGWILDGFPRTLAQAEALEELLRELGQDYDHVLNLEVPDDVVVARLLARGKEQGRSDDADEAV 141          

HSP 2 Score: 40.817 bits (94), Expect = 9.812e-19
Identity = 15/42 (35.71%), Postives = 31/42 (73.81%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 711
            KR +V+ E + P++ +YEA+G++R+ID  +P+  V + ++A+
Sbjct:  144 KRLQVYREQTAPLIDFYEARGRLRRIDGNQPMESVQEHLRAL 185          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD2_DROER7.487e-1936.07Adenylate kinase 2, mitochondrial OS=Drosophila er... [more]
KAD_THEFY7.549e-1935.77Adenylate kinase OS=Thermobifida fusca (strain YX)... [more]
KAD_PORGI8.298e-1937.96Adenylate kinase OS=Porphyromonas gingivalis GN=ad... [more]
KAD_PORG38.298e-1937.96Adenylate kinase OS=Porphyromonas gingivalis (stra... [more]
KAD_BACTN8.298e-1940.71Adenylate kinase OS=Bacteroides thetaiotaomicron G... [more]
KAD2_DROYA9.737e-1936.07Adenylate kinase 2, mitochondrial OS=Drosophila ya... [more]
KAD2_DROSI9.737e-1936.07Adenylate kinase 2, mitochondrial OS=Drosophila si... [more]
KAD2_DROSE9.737e-1936.07Adenylate kinase 2, mitochondrial OS=Drosophila se... [more]
KAD_STRCO9.770e-1935.94Adenylate kinase OS=Streptomyces coelicolor GN=adk... [more]
KAD_SYNJA9.812e-1932.59Adenylate kinase OS=Synechococcus sp. (strain JA-3... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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