DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DC900064_ssr40 microsatellite DC900064_ssr40:40..51. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:32..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_THEP3 (Adenylate kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.756e-17
Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN---EENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I + F   H+S GD+ R  ++  ++ G + +  + +G +VP EVT K+++  +E+    K FL+DG+PRN    E    F     I  + VL  +   E +  RI  R
Sbjct:    6 LGPPGAGKGTQAVKIAKEFDIPHISTGDIFRQNLRDNTDLGKLAKEYMDKGLLVPDEVTNKIVEDRLEKDDCQKGFLLDGYPRNVAQAEELDRFLHDKGIHLDCVLNIEVDREALIERITGR 127          

HSP 2 Score: 35.8094 bits (81), Expect = 1.756e-17
Identity = 16/45 (35.56%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  571 LRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 705
            L  + KR +V+   + P+++YY  K  +  ID  K V EVF+ +K
Sbjct:  165 LESVVKRLEVYESQTKPLIEYYTKKNTLVNIDGNKSVEEVFEDIK 209          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRLI (Adenylate kinase (Fragment) OS=Streptomyces lividans GN=adk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.762e-17
Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQGRED 563
            +G PG+GKGTQ   + E     H+S GDL RA I   +E G + ++ +  G +VP EVTI + + A        FL+DGFPRN     A + + + E    + VL  +  E+E+ +RI  R   R D
Sbjct:    6 VGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMDAGNLVPDEVTIAMDRTAWSSPTPRAFLLDGFPRNVSQAEALDELLETEDMKLDAVLDLEAPEDEVVKRIAGRRVCRND 132          

HSP 2 Score: 27.335 bits (59), Expect = 1.762e-17
Identity = 11/31 (35.48%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKP 678
            KR +V+   + P++ YY+++G V  I A  P
Sbjct:  170 KRLEVYHTQTEPIIDYYKSQGLVATIAATGP 200          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PROAC (Adenylate kinase OS=Propionibacterium acnes GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.044e-17
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKL-LQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRN--QGREDDNVETIR 584
            +G PG+GKGTQ   I EH+    +S GD+ R  IK+G+E G  ++ ++  G +VP E+T  + + +  ++   + FL+DG+PRN     A +A  K      + V+  D   E + +R+L R   +GR DDN ETIR
Sbjct:    6 MGAPGAGKGTQATAIAEHYSVPAISTGDMFRTNIKNGTELGKKVKAIMDAGDLVPDELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELLTQRLLKRAEIEGRTDDNEETIR 142          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CAMLR (Adenylate kinase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.044e-17
Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIV-EHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDD 566
            +G PGSGK T  + I  ++   TH S GDLLRAE+ SGSE G  I + I +G +VP EV +  +  A++ +  +  LIDG+PR+ E    F+ V K + E     V+    SEE    R+L R +G +D+
Sbjct:    8 IGAPGSGKTTDASIIANDNANITHYSTGDLLRAEVASGSELGKTIDSFISKGNLVPLEVVVNTIITALKNAPTNTILIDGYPRSVEQMLEFDKVLKNQSEVNLKGVIEVKVSEEVARERVLGRARGADDN 137          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CARHZ (Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.284e-17
Identity = 43/127 (33.86%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSEEEMERRILNRNQGRE 560
            +G PG+GKGTQ   IV+ FG TH+S GD+ RA +K+ +  G   +  + +G++VP E+ I ++++ +      K FL+DGFPR      A +   A   I  + V+  +   EE+  R+  R   R+
Sbjct:    6 MGPPGAGKGTQAEKIVKEFGITHISTGDMFRAALKNQTPLGLKAKEYMDKGELVPDEIVIAMVEERISAPDCAKGFLLDGFPRTIPQAEALDKKLAEMGITLDGVINIEVPREELIERLTGRRVCRQ 132          

HSP 2 Score: 33.113 bits (74), Expect = 2.284e-17
Identity = 14/46 (30.43%), Postives = 24/46 (52.17%), Query Frame = 1
Query:  568 TLRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 705
            +L  +  R  V+   + P+  YY   G ++ ID  K + EVF ++K
Sbjct:  164 SLETVSNRLDVYEAQTAPLKDYYAKTGLLKNIDGTKSIEEVFASIK 209          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SYNR3 (Adenylate kinase OS=Synechococcus sp. (strain RCC307) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.669e-17
Identity = 51/134 (38.06%), Postives = 82/134 (61.19%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEP-EFVLFFDCSEEEMERRILNRNQGREDDNVETIR 584
            +G PG+GKGTQ   +  + G  HLS GDLLRAE+K+GSE G   + ++  G++V   + + +++  + +S +  +L+DGFPRN     A +A+     +P + VL  +  ++E+ +R+L R  GR DDN E IR
Sbjct:    8 VGPPGAGKGTQAERLAANHGLLHLSTGDLLRAEVKAGSELGKEAEAVMNRGELVSDALVLAIVRSRL-QSHSGGWLLDGFPRNLAQAEALDALLSELNQPLQSVLLMELDDDELVQRLLAR--GRADDNEEVIR 138          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CAMC5 (Adenylate kinase OS=Campylobacter curvus (strain 525.92) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.669e-17
Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIV-EHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDN 569
            +G PGSGK T  + I  E   Y H S GDLLRAE+ SGSE G  I + I +G +VP EV +  +  A++ S     +IDG+PR+ E     + V   + E     V+  D SE     R+L R +G +D+N
Sbjct:    8 IGAPGSGKTTDASLIAKEDDKYAHFSTGDLLRAEVASGSELGKKIDSFISKGNLVPLEVVVNAIISAIKGSEKSNIIIDGYPRSVEQMTELDKVLSAQNEINLRGVIEVDVSEAIARERVLGRARGADDNN 138          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KADC_MAIZE (Adenylate kinase, chloroplastic OS=Zea mays GN=ADK1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.669e-17
Identity = 43/119 (36.13%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAME--ESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            G P SGKGTQC  I   +   H+SAGDLLRAEI +GSENG   +  +++G++VP E+ + ++++ +   ++  + +L+DG+PR+     A E + +I P+  +  D  +E +  R++ R
Sbjct:   12 GAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETL-EIRPDTFILLDVPDELLVERVVGR 129          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRPS (Adenylate kinase OS=Streptococcus pneumoniae (strain CGSP14) GN=adk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.971e-17
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E V+  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGVINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165          

HSP 2 Score: 31.187 bits (69), Expect = 2.971e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRPN (Adenylate kinase OS=Streptococcus pneumoniae GN=adk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.971e-17
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E V+  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGVINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165          

HSP 2 Score: 31.187 bits (69), Expect = 2.971e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_THEP31.756e-1734.43Adenylate kinase OS=Thermoanaerobacter pseudethano... [more]
KAD_STRLI1.762e-1736.22Adenylate kinase (Fragment) OS=Streptomyces livida... [more]
KAD_PROAC2.044e-1736.50Adenylate kinase OS=Propionibacterium acnes GN=adk... [more]
KAD_CAMLR2.044e-1739.23Adenylate kinase OS=Campylobacter lari (strain RM2... [more]
KAD_CARHZ2.284e-1733.86Adenylate kinase OS=Carboxydothermus hydrogenoform... [more]
KAD_SYNR32.669e-1738.06Adenylate kinase OS=Synechococcus sp. (strain RCC3... [more]
KAD_CAMC52.669e-1738.93Adenylate kinase OS=Campylobacter curvus (strain 5... [more]
KADC_MAIZE2.669e-1736.13Adenylate kinase, chloroplastic OS=Zea mays GN=ADK... [more]
KAD_STRPS2.971e-1734.36Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]
KAD_STRPN2.971e-1734.36Adenylate kinase OS=Streptococcus pneumoniae GN=ad... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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