DC900062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900062 vs. ExPASy Swiss-Prot
Match: SFR1A_DANRE (Splicing factor, arginine/serine-rich 1A OS=Danio rerio GN=sfrs1a PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 8.088e-21 Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 140 SGRFSXXIYXGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 397 +G IY GNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ RDGY++DG RLRVE G G G Sbjct: 10 AGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMG 95
BLAST of DC900062 vs. ExPASy Swiss-Prot
Match: SFRS9_MOUSE (Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.380e-20 Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 134 EMSGRFSXXIYXGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 397 E G IY GNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY++ CRLRVE GRG Sbjct: 8 ERGGEGDGRIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRG 95
BLAST of DC900062 vs. ExPASy Swiss-Prot
Match: SFRS9_RAT (Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.802e-20 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 134 EMSGRFSXXIYXGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 397 E G IY GNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY++ CRLRVE GRG Sbjct: 7 ERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRG 94
BLAST of DC900062 vs. ExPASy Swiss-Prot
Match: SFRS9_HUMAN (Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.073e-20 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 134 EMSGRFSXXIYXGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 397 E G IY GNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY++ CRLRVE GRG Sbjct: 7 ERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRG 94
BLAST of DC900062 vs. ExPASy Swiss-Prot
Match: RSP6_CAEEL (Probable splicing factor, arginine/serine-rich 6 OS=Caenorhabditis elegans GN=rsp-6 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.786e-13 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 161 IYXGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELA----HGGSGRG 397 +Y G LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG G R RVEL+ GG GRG Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARVELSTGQRRGGGGRG 85
BLAST of DC900062 vs. ExPASy Swiss-Prot
Match: RBP1_DROME (RNA-binding protein 1 OS=Drosophila melanogaster GN=Rbp1 PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 5.810e-11 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 161 IYXGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGS 388 +Y GNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA R DG G R+RVE++ G S Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNVW--VARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRS 86 The following BLAST results are available for this feature:
BLAST of DC900062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900062 ID=DC900062; Name=DC900062; organism=Citrus sinensis; type=EST; length=403bpback to top |