CN185852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21B_YEAST (40S ribosomal protein S21-B OS=Saccharomyces cerevisiae GN=RPS21B PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16 Identity = 38/74 (51.35%), Postives = 59/74 (79.73%), Query Frame = -2 Query: 258 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADG-IYTGQFSTFALCGFVRAQGDGDSAIDRLWQ 476 M+N++GQ ++LY+PRKCSATNR+I + DHA+VQIN+ VD +G G++ T+AL G+VR++G+ D +++RL Q Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYITYALSGYVRSRGESDDSLNRLAQ 74
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21A_YEAST (40S ribosomal protein S21-A OS=Saccharomyces cerevisiae GN=RPS21A PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16 Identity = 38/74 (51.35%), Postives = 59/74 (79.73%), Query Frame = -2 Query: 258 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADG-IYTGQFSTFALCGFVRAQGDGDSAIDRLWQ 476 M+N++GQ ++LY+PRKCSATNR+I + DHA+VQIN+ VD +G G++ T+AL G+VR++G+ D +++RL Q Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYVTYALSGYVRSRGESDDSLNRLAQ 74
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_XENLA (40S ribosomal protein S21 OS=Xenopus laevis GN=rps21 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.796e-16 Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = -2 Query: 264 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRL 476 MQN+ G+ +DLY+PRKCSA+NR+I +KDHA++QINI VD G + Q+ T+A+CG +R G+ D +I RL Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDKVTGRFNSQYKTYAICGAIRRMGESDDSIMRL 72
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_CANGA (40S ribosomal protein S21 OS=Candida glabrata GN=RPS21 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.796e-16 Identity = 41/74 (55.41%), Postives = 58/74 (78.38%), Query Frame = -2 Query: 258 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADG-IYTGQFSTFALCGFVRAQGDGDSAIDRLWQ 476 M+N++GQ ++LYIPRKCSATNR+I + DHA+VQINI VD +G G++ T+AL G VRA+G+ D +++RL Q Sbjct: 1 MENDKGQLVELYIPRKCSATNRIIKADDHASVQINIAKVDEEGRAIPGEYITYALSGNVRARGESDDSLNRLAQ 74
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_XENTR (40S ribosomal protein S21 OS=Xenopus tropicalis GN=rps21 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.345e-16 Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = -2 Query: 264 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRL 476 MQN+ G+ +DLY+PRKCSA+NR+I +KDHA++QINI VD G + Q+ T+A+CG +R G+ D +I RL Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDKVTGRFNSQYKTYAICGAIRRMGESDDSILRL 72
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_SUBDO (40S ribosomal protein S21 OS=Suberites domuncula GN=RPS21 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.985e-15 Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = -2 Query: 264 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRL 476 MQNE G+ +D+YIPRKCSA+ R+I ++D+AAVQ+NI VD G TG F T+A+ GF+RA G+ D + R+ Sbjct: 1 MQNEAGETVDVYIPRKCSASGRIIGARDYAAVQLNIADVDEKTGRVTGGFKTYAVSGFIRAMGESDDCLHRI 72
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_IXOSC (40S ribosomal protein S21 OS=Ixodes scapularis GN=RpS21 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.386e-15 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = -2 Query: 264 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRL 476 MQNE G+ +DLYIPRKCS +NR+I +KDHA++QIN+ VD G TG+ +A+CG +R G+ D I RL Sbjct: 1 MQNEAGEYVDLYIPRKCSTSNRIIHAKDHASIQINLAIVDEQSGRATGETKPYAICGAIRRMGESDDCITRL 72
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_NEUCR (40S ribosomal protein S21 OS=Neurospora crassa GN=rps-21 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.287e-14 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADG-IYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 M+N+ G+ +DLY+PRKCSAT R+I SKDH + QI I VD +G G+ +AL GFVRA G+ D +++RL Q+ Sbjct: 1 MENDRGEIVDLYVPRKCSATGRIIKSKDHGSCQITIAKVDENGRAIQGENIIYALSGFVRAMGESDDSLNRLAQR 75
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_CERCA (40S ribosomal protein S21 OS=Ceratitis capitata GN=RpS21 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.867e-14 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDAD-GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 M+N+ G+++DLY PRKCSA+NR+I +KDHA+VQ+NI VD + G T T+A+CG +R G+ D I RL +K Sbjct: 1 MENDAGESVDLYCPRKCSASNRIIHAKDHASVQLNIVDVDPETGRMTVGSKTYAICGEIRRMGESDDCIVRLAKK 75
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_CAEBR (40S ribosomal protein S21 OS=Caenorhabditis briggsae GN=rps21 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14 Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = -2 Query: 231 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDAD--GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 476 MQN+ GQ ++LY+PRKCS++NR+I KDHAAVQI+ VD + + G+ + +A+CG +R G+ D AI RL QK + R + Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHAAVQIDFVDVDPETGRMIPGKSTRYAICGALRRMGESDDAILRLAQKDGLVPRDE 84 The following BLAST results are available for this feature:
BLAST of CN185852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185852 ID=CN185852; Name=CN185852; organism=Citrus sinensis; type=EST; length=546bpback to top |