CN185852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_CAEEL (40S ribosomal protein S21 OS=Caenorhabditis elegans GN=rps-21 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDAD--GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 MQN+ GQ ++LY+PRKCS++NR+I KDHA+VQI+ VD + + G+ + +A+CG +R G+ D AI RL QK Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAIRRMGESDDAILRLAQK 76
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_AGRLI (40S ribosomal protein S21 OS=Agriotes lineatus GN=RpS21 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.427e-13 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGH-VDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 M+N+ G+ +DLY PRKCSA+NR+I +KDHA++Q++I V A G T ++ALCG +R G+ D I RL +K Sbjct: 1 MENDAGEFVDLYCPRKCSASNRIIHAKDHASIQLSIAEVVPATGRMTENTKSYALCGAIRRMGESDDCIVRLTKK 75
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_BIPLU (40S ribosomal protein S21 OS=Biphyllus lunatus GN=RpS21 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDAD-GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 M+N+ G+ +DLY PRKCSA+NR+I +KDHA++Q+ + VD G T ++ALCG +R G+ D I RL +K Sbjct: 1 MENDAGEFVDLYCPRKCSASNRIIHAKDHASIQLCVAEVDPQTGRMTDSTKSYALCGAIRRMGESDDCIVRLTKK 75
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_PLUXY (40S ribosomal protein S21 OS=Plutella xylostella GN=RpS21 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.406e-13 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = -2 Query: 237 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVR 476 MQN+ G+ +DLY PRKCSA+NRLI +KDHA+VQ+ I VD A G + +CG +R G+ D I RL +K + V+ Sbjct: 1 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGAIRRMGESDDCIVRLTKKDGILVK 81
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_SPOFR (40S ribosomal protein S21 OS=Spodoptera frugiperda GN=RpS21 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 MQN+ G+ +DLY PRKCSA+NRLI +KDHA+VQ+ I VD A G + +CG +R G+ D I RL +K Sbjct: 1 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKK 75
BLAST of CN185852 vs. ExPASy Swiss-Prot
Match: RS21_BOMMO (40S ribosomal protein S21 OS=Bombyx mori GN=RpS21 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 255 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 476 MQN+ G+ +DLY PRKCSA+NRLI +KDHA+VQ+ I VD A G + +CG +R G+ D I RL +K Sbjct: 1 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKK 75 The following BLAST results are available for this feature:
BLAST of CN185852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185852 ID=CN185852; Name=CN185852; organism=Citrus sinensis; type=EST; length=546bpback to top |