CN185850

Overview
NameCN185850
Unique NameCN185850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.577e-13
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 2
Query:   38 VIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVSSRNKAPVDSEL 241
            V GT GY  PEY KT QL+ KSDV+SFGVVLLEI+SGR+ ++  +   E SLV W     +A    E+
Sbjct:  758 VRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEI 825          

HSP 2 Score: 30.8018 bits (68), Expect = 1.577e-13
Identity = 13/43 (30.23%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  355 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 483
            I DP ++G Y     ++ + VA  C+      RP + D+V  L
Sbjct:  825 IVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVREL 867          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.585e-13
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 2
Query:   53 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVSSR 214
            GY APE+ + G    KSD Y+ GV+LLE+L+GRKA D+S+   EQ LV W S+R
Sbjct:  586 GYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAFDSSRPRGEQLLVKWASTR 639          

HSP 2 Score: 33.4982 bits (75), Expect = 1.585e-13
Identity = 21/84 (25.00%), Postives = 38/84 (45.24%), Query Frame = 1
Query:  298 ILTSWQARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESDAEKVQSPCLDP 549
            +L  W +  L   R+   +I D  + G +  R   Q   + ++C   + + RP ++++V AL  L  QK   +A    +   DP
Sbjct:  631 LLVKWASTRLHDRRSLEQMI-DGGIAGTFSSRVASQYADIISLCTQAEKEFRPPVSEIVEALTALI-QKQNKEASSSVADKTDP 712          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 2.048e-13
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 2
Query:   38 VIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVSSRNKAPVDSEL 241
            V GT GY  PEY KT QL+ KSDV+SFGVVLLEI+SGR+ ++  +   E SLV W     +A    E+
Sbjct:  759 VRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEI 826          

HSP 2 Score: 30.8018 bits (68), Expect = 2.048e-13
Identity = 13/43 (30.23%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  355 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 483
            I DP ++G Y     ++ + VA  C+      RP + D+V  L
Sbjct:  826 IVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVREL 868          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.497e-13
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 2
Query:   44 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVS-SRNKAPVDSEL 241
            GT+GY  PEY +T +LT KSDVY+FGVVLLE+L  R A+D      E +L  WV   ++K  +D  L
Sbjct:  651 GTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEIL 717          

HSP 2 Score: 32.7278 bits (73), Expect = 4.497e-13
Identity = 16/46 (34.78%), Postives = 23/46 (50.00%), Query Frame = 1
Query:  355 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 492
            I DP L GQ       + + +A  C+ E  D RP + DV+  L Y+
Sbjct:  716 ILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYV 761          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVSS 211
            RV+GT+GY APEYA TG L  KSD+YSFG++++EI++GR  VD S+   E +LV W+ S
Sbjct:  315 RVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKS 373          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.773e-13
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 2
Query:   26 CIYRVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVSSRNKA--PVDSELRRYFEKSTEFI*LMQML 292
            C   V G+YGY APEY  + ++T KSDVYS+GVV+LE+L+G++ +D +       LV WV     +   +DS LR   E   +   +MQ+L
Sbjct:  952 CSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIH-LVDWVRQNRGSLEVLDSTLRSRTEAEADE--MMQVL 1039          

HSP 2 Score: 33.113 bits (74), Expect = 9.773e-13
Identity = 20/62 (32.26%), Postives = 29/62 (46.77%), Query Frame = 1
Query:  403 QALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESDAEKVQSPCLDPGTPTRTKRDKERK 588
            Q L  A +CV+  PD RP + DV   L  +  ++ E    KV         PT T +++ RK
Sbjct: 1037 QVLGTALLCVNSSPDERPTMKDVAAMLKEIKQEREE--YAKVDLLLKKSPPPTTTMQEECRK 1096          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 60.4622 bits (145), Expect = 2.146e-12
Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 2
Query:   38 VIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWV 205
            ++GT GY  PEY +    T K DVYSFGVVLLE+L+ ++ VD  K    + L++WV
Sbjct:  896 LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWV 951          

HSP 2 Score: 31.9574 bits (71), Expect = 2.146e-12
Identity = 16/61 (26.23%), Postives = 30/61 (49.18%), Query Frame = 1
Query:  301 LTSWQARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 483
            L SW  +   +  +R S + DP +  +   +  ++ L +A +C+ E P  RP    +V+ L
Sbjct:  947 LISWVVK--MKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWL 1005          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWV 205
            RV+GT+GY APEYA TG L  KSD+YSFGV+LLE ++GR  VD  + A E +LV W+
Sbjct:  344 RVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWL 400          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12
Identity = 31/56 (55.36%), Postives = 44/56 (78.57%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAW 202
            R+ GT+GY APEYA TG++T K DVYSFGV+L+E+++GRK++D S+      LV+W
Sbjct:  752 RIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSW 807          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.255e-12
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLV--AWVSSRNKAPVD 232
            R++GTYGY APEYA  GQ ++KSDVYSFGV++LEI+SGRK     ++   Q L+  AW    NK  +D
Sbjct:  512 RIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQDLLTHAWRLWTNKKALD 579          
The following BLAST results are available for this feature:
BLAST of CN185850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
NORK_PEA1.577e-1351.47Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
SRF2_ARATH1.585e-1353.70Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
NORK_MEDTR2.048e-1351.47Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y2232_ARATH4.497e-1349.25Probable receptor-like protein kinase At2g23200 OS... [more]
Y1154_ARATH6.208e-1355.93Probable serine/threonine-protein kinase At1g01540... [more]
RCH2_ARATH9.773e-1340.66Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PSKR1_ARATH2.146e-1248.21Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y2296_ARATH2.359e-1259.65Probable receptor-like protein kinase At2g42960 OS... [more]
TMK1_ARATH4.024e-1255.36Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK6_ARATH5.255e-1252.94Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185850 ID=CN185850; Name=CN185850; organism=Citrus sinensis; type=EST; length=773bp
CTTGGTCCTGTTGGTGAAACACCCATGTATCTACAGGGTCATTGGAACTT
ATGGATACTGTGCTCCAGAGTATGCAAAGACAGGCCAACTGACTTTAAAA
TCAGATGTGTATAGCTTTGGGGTTGTTCTTCTGGAAATCCTTTCAGGCAG
GAAAGCAGTTGACACTTCAAAAGCTGCAGCAGAGCAGAGTCTGGTTGCAT
GGGTAAGCAGCAGAAATAAAGCACCTGTTGACTCGGAACTAAGAAGATAT
TTTGAAAAGAGTACTGAGTTTATATAACTTATGCAAATGTTACATTAATC
TTGACTTCATGGCAGGCAAGACCACTGTTCCAAGACCGAACAAGACACTC
ACTCATTGCTGATCCAGAGCTTCAAGGTCAATATCCTCCTAGGGGCTTCT
ATCAAGCTCTTGCTGTTGCAGCAATGTGTGTCCATGAGCAGCCTGATATG
CGACCGGTCATTGCTGATGTGGTCACTGCCTTGGCTTACCTTGCTTCTCA
AAAGTATGAATCTGACGCAGAGAAGGTCCAAAGCCCTTGCCTGGACCCTG
GTACTCCTACTAGAACGAAGAGGGACAAAGAAAGGAAGCTCAACGGTGGT
CGTGGATCTGAAAGAGAGCGAACCAGAAAACTAAAATGAAATTACCCAGT
GTTTGCTACAAGTTGCTTGCACTTCTGGTACGGATCAGGCTTCTCTCATG
CAAGCCAGCCATAGAAACTGCTTAGTGAAGATCGGGAAAATGCTCTGATG
CCAACATTACGATTGTGGTTTTC
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