CN185850

Overview
NameCN185850
Unique NameCN185850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 6.074e-12
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 2
Query:   20 HPCIYRVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAW 202
            H  +  + GT GY  PEY ++ + T K DVYS+GV+LLE+LSG+K +D  +   + +LV W
Sbjct: 1016 HLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGW 1076          

HSP 2 Score: 29.261 bits (64), Expect = 6.074e-12
Identity = 21/74 (28.38%), Postives = 37/74 (50.00%), Query Frame = 1
Query:  301 LTSWQARPLFQDRTRHSLIADPEL-QGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESDA 519
            L  W A+ L++++ R + I DPEL   +         L +A+ C+ ++P  RP +  V+T    L     E+D+
Sbjct: 1073 LVGW-AKQLYREK-RGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFKELVQVDTENDS 1144          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQS--LVAWVSSRNKA 223
            RV GT+GY APEYA  GQLT KSDVYSFGVV+LEI+ GRKA+D S + +  +  +  W  S  KA
Sbjct:  461 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKA 525          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 37/59 (62.71%), Postives = 41/59 (69.49%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWVSS 211
            RV GT GY APEYA  GQLT KSDVYSFGVVLLE+LS RKA+ T +     S+  W  S
Sbjct:  447 RVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWS 505          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.331e-11
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 2
Query:   44 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWV 205
            G+YGY APE+A   ++T KSDVYS+GVVLLE+L+G+  +D         LV WV
Sbjct:  929 GSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAH-LVKWV 981          

HSP 2 Score: 32.7278 bits (73), Expect = 1.331e-11
Identity = 24/81 (29.63%), Postives = 38/81 (46.91%), Query Frame = 1
Query:  301 LTSWQARPLFQDRTRHSLIADPELQGQYPP--RGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS-QKYESDAEKVQS 534
            L  W  R    ++   S + DP L G+         Q LAVA +CV  + + RP++ DVV  L  +       S+ EK+++
Sbjct:  977 LVKW-VRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEIRHIDVGRSETEKIKA 1056          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRK--AVDTSKAAAEQSLVAWVSSRNKAPVD 232
            R++GTYGY APEYA  GQ ++KSDVYSFGV++LEI+SGRK  + D S  A +     W    N+  +D
Sbjct:  514 RIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALD 581          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV---DTSKAAAEQSLVAWVSSRNKAP---VDSELRRYFEKSTEF 271
            RV+GT+GY +PEY   GQ ++KSDVYSFGV++LEI+SG++     +T ++       AW   RN +P   VDSEL + ++ +  F
Sbjct:  482 RVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVF 566          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.997e-11
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLV--AWVSSRNKAPVD 232
            R++GTYGY +PEYA  GQ ++KSDVYSFGV++LEI+SGRK     +    Q LV  AW   RN   +D
Sbjct:  497 RIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALD 564          
BLAST of CN185850 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2
Query:   35 RVIGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR--KAVDTSKAAAEQSLVAWVSSR 214
            RV+GTYGY APEYA  GQ + KSDVYSFGV+LLE++SG+  K ++  +   E+ L A+V  R
Sbjct:  506 RVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKR 567          
The following BLAST results are available for this feature:
BLAST of CN185850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
BRL3_ARATH6.074e-1244.26Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y1105_ARATH6.864e-1258.46Probable receptor-like protein kinase At1g11050 OS... [more]
RKF3_ARATH1.171e-1162.71Probable LRR receptor-like serine/threonine-protei... [more]
Y4265_ARATH1.331e-1151.85Probable LRR receptor-like serine/threonine-protei... [more]
CRK8_ARATH1.529e-1151.47Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK33_ARATH1.529e-1143.53Putative cysteine-rich receptor-like protein kinas... [more]
CRK7_ARATH1.997e-1152.94Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK37_ARATH9.911e-1154.84Cysteine-rich receptor-like protein kinase 37 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185850 ID=CN185850; Name=CN185850; organism=Citrus sinensis; type=EST; length=773bp
CTTGGTCCTGTTGGTGAAACACCCATGTATCTACAGGGTCATTGGAACTT
ATGGATACTGTGCTCCAGAGTATGCAAAGACAGGCCAACTGACTTTAAAA
TCAGATGTGTATAGCTTTGGGGTTGTTCTTCTGGAAATCCTTTCAGGCAG
GAAAGCAGTTGACACTTCAAAAGCTGCAGCAGAGCAGAGTCTGGTTGCAT
GGGTAAGCAGCAGAAATAAAGCACCTGTTGACTCGGAACTAAGAAGATAT
TTTGAAAAGAGTACTGAGTTTATATAACTTATGCAAATGTTACATTAATC
TTGACTTCATGGCAGGCAAGACCACTGTTCCAAGACCGAACAAGACACTC
ACTCATTGCTGATCCAGAGCTTCAAGGTCAATATCCTCCTAGGGGCTTCT
ATCAAGCTCTTGCTGTTGCAGCAATGTGTGTCCATGAGCAGCCTGATATG
CGACCGGTCATTGCTGATGTGGTCACTGCCTTGGCTTACCTTGCTTCTCA
AAAGTATGAATCTGACGCAGAGAAGGTCCAAAGCCCTTGCCTGGACCCTG
GTACTCCTACTAGAACGAAGAGGGACAAAGAAAGGAAGCTCAACGGTGGT
CGTGGATCTGAAAGAGAGCGAACCAGAAAACTAAAATGAAATTACCCAGT
GTTTGCTACAAGTTGCTTGCACTTCTGGTACGGATCAGGCTTCTCTCATG
CAAGCCAGCCATAGAAACTGCTTAGTGAAGATCGGGAAAATGCTCTGATG
CCAACATTACGATTGTGGTTTTC
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