CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 245.358 bits (625), Expect = 2.674e-64 Identity = 121/159 (76.10%), Postives = 130/159 (81.76%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ SFNNVKQWL EIDRYASENVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 46 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.016e-63 Identity = 121/160 (75.62%), Postives = 135/160 (84.38%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVN-QKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DLT KVV + TAK +AD++GIPF+ETSAK+ATNVEQAFM MAA IKNRM A+++++P PV+ K GCC Sbjct: 46 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVSANKGGCC 205
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.242e-61 Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV Q G C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.767e-61 Identity = 119/159 (74.84%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRT+TSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +G+PF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV SG C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKSASGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.767e-61 Identity = 120/159 (75.47%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +G+PF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV SG C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPASGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 6.165e-61 Identity = 120/159 (75.47%), Postives = 128/159 (80.50%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV G C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 6.165e-61 Identity = 120/159 (75.47%), Postives = 128/159 (80.50%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV G C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.373e-60 Identity = 120/159 (75.47%), Postives = 128/159 (80.50%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQER RTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV Q G C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.794e-60 Identity = 119/159 (74.84%), Postives = 128/159 (80.50%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++ DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ES+ NVKQWL EIDRYASENVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS R P ++I PV G C Sbjct: 43 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.060e-60 Identity = 112/160 (70.00%), Postives = 135/160 (84.38%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQP-ASNNARPPTVQIRGQPVNQKSGCC 775 VDFKIRT++QDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+GNK D+ +KVVS ET +A ADE+GIPF+ETSAK + NVEQAF+ +A IK +M SQ A+ + P TVQ++GQP+ Q +G C Sbjct: 43 VDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGC 202 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |