CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = -1 Query: 386 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRY-ASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNR 769 +KIR + D + L I DTAGQ F + Y R G I+ Y +TD+ SF+ V+++ I R +++ +LVGNK DL + V+ E A A E PF ETSA ++ F A+ I+ + Sbjct: 58 YKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 185
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RBL2B_HUMAN (Rab-like protein 2B OS=Homo sapiens GN=RABL2B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = -1 Query: 416 TVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF 757 T DG+TI + WDTAGQERF+++ +SYY AH I+V+DV + ++ N+ W E+ + E + ++V NK D S+ AK F+ +P SA TNV + F Sbjct: 62 TATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDDINVTQKSFNFAKKFS----LPLYFVSAADGTNVVKLF 170
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAP1A_RAT (Ras-related protein Rap-1A OS=Rattus norvegicus GN=Rap1a PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = -1 Query: 386 RTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 760 + V+ D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAP1A_MOUSE (Ras-related protein Rap-1A OS=Mus musculus GN=Rap1a PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = -1 Query: 386 RTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 760 + V+ D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAP1A_HUMAN (Ras-related protein Rap-1A OS=Homo sapiens GN=RAP1A PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = -1 Query: 386 RTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 760 + V+ D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAP1A_BOVIN (Ras-related protein Rap-1A OS=Bos taurus GN=RAP1A PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = -1 Query: 386 RTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 760 + V+ D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = -1 Query: 314 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK-NRMASQPASNNARPPTVQIRGQPVNQ 733 IK +WDTAGQE+F + YY A I+++DVT + ++ NV W ++ R EN+ +L GNK D+ KV + F + + + + SAKS N E+ F+ +A + N AS PP VQ+ Q + Q Sbjct: 56 IKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMQQ 193
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13 Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = -1 Query: 314 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK-NRMASQPASNNARPPTVQIRGQPVNQ 733 IK +WDTAGQE+F + YY A I+++DVT + ++ NV W ++ R EN+ +L GNK D+ KV + F + + + + SAKS N E+ F+ +A + N AS PP VQ+ Q + Q Sbjct: 56 IKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLDFVASPALAPPEVQVDEQLMQQ 193
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAP1B_RAT (Ras-related protein Rap-1b OS=Rattus norvegicus GN=Rap1b PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.665e-13 Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = -1 Query: 386 RTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 760 + V+ D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +++V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 42 KQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.787e-13 Identity = 45/157 (28.66%), Postives = 70/157 (44.59%), Query Frame = -1 Query: 299 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLV-GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPAS-------NNARPPTVQIRGQPVNQKSGCC 745 D + L + DTAGQE + + Y R G ++VY +T + SF + + +I R ++ ++V NKCDL + V + A G F+ETSAK NV+QAF + I+ Q + PP P ++ +G C Sbjct: 54 DDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREIRKYNKEQQTTGRMMTGGGGGGPPGTYAGKDPNDEGAGGC 210 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |