CN185842 | Citrus Genome Database

Overview


Name	CN185842
Unique Name	CN185842
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	717

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig12147	contig	Csv1_Contig12147:23..739.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.807e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 7.807e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 139.428 bits (350), Expect = 1.800e-32
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.739e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.443 bits (376), Expect = 1.739e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.887 bits (346), Expect = 5.236e-32
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.060e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.060e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.732 bits (343), Expect = 1.167e-31
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

[Close]

BLAST of CN185842 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.609e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 6.609e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  273 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 500
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.346 bits (342), Expect = 1.524e-31
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 3

Query:  501 MQIFVKTLTWKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 716
            MQIFVKTLT KTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

The following BLAST results are available for this feature:

BLAST of CN185842 vs. ExPASy Swiss-Prot

BLAST of CN185842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	7.807e-36	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	1.739e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	2.271e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	3.874e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	3.874e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	3.874e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	3.874e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	3.874e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	5.060e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	6.609e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0001P06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P06, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN185842 ID=CN185842; Name=CN185842; organism=Citrus sinensis; type=EST; length=717bp
ATGATCAATTCTTCCTTCGTTCGCAAGAAAAAGCTCTGTTCGATATGCAG
ATCTTCGTGAAAACCTTGACCGGAAAAACTATTACTCTCGAAGTCGAGAG
CTCGGACACCATCGACAACGTAAAGGCCAAGATCCAAGACAAGGAGGGAA
TTCCGCCGGACCAGCAGAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGAC
GGCCGCACCTTGGCCGATTACAACATCCAGAAGGAGTCAACCCTTCATCT
TGTCCTTCGTCTCCGCGGAGGCATGCAGATCTTCGTGAAAACCCTGACTG
GCAAAACTATTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAACGTC
AAGGCGAAGATTCAAGACAAGGAGGGAATCCCCCCGGACCAGCAGAGGCT
TATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACA
ACATACAGAAGGAGTCAACCCTCCATCTTGTCCTTCGTCTCCGCGGAGGC
ATGCAGATCTTTGTCAAAACCCTAACCTGGAAGACGATAACCCTCGAGGT
TGAGAGCTCAGACACGATCGATAACGTTAAGGCGAAGATTCAAGACAAGG
AGGGAATCCCCCCGGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTG
GAAGACGGCCGCACCTTGGCTGATTACAATATCCAGAAGGAGTCAACCCT
TCATCTCGTCCTCAGGC