DC900033

Overview
NameDC900033
Unique NameDC900033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 58/188 (30.85%), Postives = 97/188 (51.60%), Query Frame = 3
Query:   78 LGRSGLRVSQLAYGAWVSFGNQL-------DVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQG------------------PNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAER 566
            LG SGL++S +  G  +S+G++        D  +   +++ C D G+  FD A+ Y+NG +E I+ + +     KR  +V+ TKI++                       N +GLSRKHI+ G + S+KRL   Y+D++  HR D  TP++E ++A+N V++ G   Y G S   A +  E    A++
Sbjct:    9 LGNSGLKISPIVIGC-MSYGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQRGLSRKHIIAGVENSVKRLG-TYIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADK 194          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.465e-17
Identity = 57/178 (32.02%), Postives = 92/178 (51.69%), Query Frame = 3
Query:   75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGR----AEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPND-----KGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVG 581
            +LGR+GLRVS+L  G  ++FG   D   A  ++    D+G+ FFD A +Y  G+     E I+G+   + G +R  +V++TK++     PND     +GLS   I    + SLKRL  D++++   H  D  TP +E   A    +  G   Y G+S ++   + +A   AE+   +G
Sbjct:    5 YLGRTGLRVSRLCLGT-MNFGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMG 181          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YI7E_SCHPO (Putative aryl-alcohol dehydrogenase C977.14c OS=Schizosaccharomyces pombe GN=SPAC977.14c PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17
Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 3
Query:   78 LGRSGLRVSQLAYGAWVSFGNQL--------DVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFW----------------------GGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAER 566
            LG SGL+VS+L  G  +S+G +         D  E   +++   D G+  FD A  Y+ G +EE++G+ IR+    RS IV+ +K F+                        +  N  GLSRKHI +  + S+KRL   Y+DV+  HR D     EE +RA+N V++ G   Y G S     Q  E    AE+
Sbjct:   12 LGNSGLKVSKLILGC-MSYGKKEYWEDWVLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGKFIRKYEIPRSSIVILSKCFFPVRKDLIKIFGDLSSRGVHFLDSPELANQCGLSRKHIFDAVEDSVKRLG-TYIDVLQIHRYDPHVSAEEVMRALNDVVESGKVRYIGASTMRCYQFIELQNTAEK 202          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 7.271e-17
Identity = 52/155 (33.55%), Postives = 80/155 (51.61%), Query Frame = 3
Query:   87 SGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCR---DHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPN-DKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQI 539
            +G+  S++  G W   G      + K+ ++  R   D G+   D A  Y  G++EEI+G+AI+E G KR  ++++TK     +     +  +R  IVE  + SLKRL  DY+D+   H PD   PIEET   M  + D G     G S +S +Q+
Sbjct:    9 TGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYG-KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQM 162          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB3_MOUSE (Voltage-gated potassium channel subunit beta-3 OS=Mus musculus GN=Kcnab3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.496e-17
Identity = 36/73 (49.32%), Postives = 55/73 (75.34%), Query Frame = 3
Query:  369 GTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587
            G + SL RL ++YVD+++ +R D ++P+EE VRAM YVI++G A YWGTS WSA +I EA+ +A + +L+ P+
Sbjct:   25 GLQGSLDRLQLEYVDIVFANRSDPNSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPV 97          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.609e-16
Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3
Query:   78 LGRSGLRVSQLAYGAWVSFGNQL----DVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGL----SRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITE 545
            LG++ L+V ++ +GA    G+ L    +    K L++   D GVNF D A +Y  GR+EE++G+ ++E G  R++++++TK   G     D  +    SR+ +    + SLKRL  DY+D+ Y H PD  TP+ E    +  + D+G     G S    QQ+ +
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERG-VRNELIIATK---GAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQD 166          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.155e-16
Identity = 57/166 (34.34%), Postives = 86/166 (51.81%), Query Frame = 3
Query:   78 LGRSGLRVSQLAYGAWVSFGNQL----DVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQG-----PNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEA 548
            LG+S L+V  +  G     G+ L    +    K L++    +GV   D A +Y  GR+EE++G+ +RE  + R D+V++TK     QG      N     +K + E    SLKRL+ DY+D+ Y H PD  TP +E V A+N +   G     G S +S +Q+ EA
Sbjct:    6 LGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLRE--FNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDE----SLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEA 165          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: NORA_ASPPA (Norsolorinic acid reductase OS=Aspergillus parasiticus GN=norA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.524e-14
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 3
Query:   87 SGLRVSQLAYGAWVSFGN-------QLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQ--GP-----NDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAW 551
            +G+RVS L  G  +SFGN       + D   + ++L    + G NF D A  Y  G  E  +G+ + +    R +IV+STK   G    GP     N +G   K +    KASL++L  DY+D++Y H  D +T +EE +R++N+++  G   Y G S+      T AW
Sbjct:   23 AGVRVSPLCLGT-MSFGNGWKGVMGECDQATSFNMLDTFYESGGNFIDVANFYQGGDTERWVGEWMAQRQ-NRDEIVLSTKYTMGYTMFGPQKIKSNFQGNHAKSLRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSD------TPAW 183          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: NORA_ASPFL (Norsolorinic acid reductase OS=Aspergillus flavus GN=norA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.524e-14
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 3
Query:   87 SGLRVSQLAYGAWVSFGN-------QLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQ--GP-----NDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAW 551
            +G+RVS L  G  +SFGN       + D   + ++L    + G NF D A  Y  G  E  +G+ + +    R +IV+STK   G    GP     N +G   K +    KASL++L  DY+D++Y H  D +T +EE +R++N+++  G   Y G S+      T AW
Sbjct:   23 AGVRVSPLCLGT-MSFGNGWKGVMGECDQATSFNMLDTFYESGGNFIDVANFYQGGDTERWVGEWMAQRQ-NRDEIVLSTKYTMGYTMFGPQKIKSNYQGNHAKSLRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSD------TPAW 183          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.129e-12
Identity = 55/164 (33.54%), Postives = 84/164 (51.22%), Query Frame = 3
Query:   78 LGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIF--W--GGQG----PNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITE 545
            LG S L +S++  G  +S G + +  +A S+L    + G+N+ D A++Y  GR EEI+G AI+    +R DI+++TK    W  G +G    P     S+ +I E  K SL RL  DY+D+   H       I+ET+ A   +  +G   Y+G S      I E
Sbjct:    6 LGTSDLDISEVGLGC-MSLGTEKN--KALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQN---RRHDIILATKAGNRWDDGSEGWYWDP-----SKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKE 158          
The following BLAST results are available for this feature:
BLAST of DC900033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
YP088_YEAST1.015e-1830.85Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]
YRPG_BACSU1.465e-1732.02Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
YI7E_SCHPO3.264e-1732.64Putative aryl-alcohol dehydrogenase C977.14c OS=Sc... [more]
GS69_BACSU7.271e-1733.55General stress protein 69 OS=Bacillus subtilis GN=... [more]
KCAB3_MOUSE9.496e-1749.32Voltage-gated potassium channel subunit beta-3 OS=... [more]
YCCK_BACSU3.609e-1632.32Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
IOLS_BACSU6.155e-1634.34Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
NORA_ASPPA7.524e-1433.14Norsolorinic acid reductase OS=Aspergillus parasit... [more]
NORA_ASPFL7.524e-1433.14Norsolorinic acid reductase OS=Aspergillus flavus ... [more]
YQKF_BACSU4.129e-1233.54Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionDC900033 VSS Citrus sinensis cDNA clone VS27Q42 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900033 ID=DC900033; Name=DC900033; organism=Citrus sinensis; type=EST; length=587bp
GTACACTTCCCCAACAGGCCAAAAAAACAGACAACAAAAAGGTTAAAAAA
GGAAATTACAAAATGCAATACAAGCACCTGGGGAGATCGGGGCTGAGAGT
GAGCCAGCTCGCGTACGGAGCGTGGGTCAGCTTCGGGAACCAGCTGGACG
TGANNGAGGCGAAGTCGCTCTTGCAATGCTGCCGCGACCACGGCGTCAAC
TTCTTCGACAATGCCGAGGTCTACGCCAACGGCCGCGCGGAAGAGATCAT
GGGCCAGGCCATTCGCGAGCTCGGGTGGAAGCGATCCGACATCGTCGTTT
CCACCAAGATCTTTTGGGGCGGCCAGGGCCCCAACGATAAAGGCCTCTCC
AGAAAACACATTGTCGAGGGCACCAAAGCTTCCTTGAAACGCCTCGACAT
GGATTACGTCGACGTTATTTATTGTCACAGGCCGGACACGTCGACACCGA
TAGAGGAGACGGTGAGGGCGATGAATTATGTGATTGATAAGGGGTGGGCG
TTTTACTGGGGAACAAGTGAGTGGTCGGCGCAGCAGATCACCGAGGCTTG
GGGGATTGCTGAGCGCTTGGATTTGGTGGGCCCCATT
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