DC900030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26 Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 2 Query: 20 APKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 427 AP +SQ KR+ EL L SA P D++F W+ TI G D+ F G + +S+ F DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 26 APTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26 Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 53 SKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 448 +KR+ EL L S SA PV D D+ +W I GP D+P++G F VS+ FP +YPF PP + F + ++HPN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL A ++ D +Y Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26 Identity = 55/148 (37.16%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 11 NSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 451 NS + + + +KR+ EL L SA P +D ++ HW TI GPSD+ + G F +S+ FP +YP+ PP + F + ++HPN++ +G+ICLDILK++WS + +LLS+ SLL +PN PL + A ++ D +Y+ Sbjct: 16 NSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYK 163
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 478 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25 Identity = 56/158 (35.44%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 47 MASKRINKELKDLQKDPPASCSAGPV-ADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 478 MA +R+ KE K+L ++ P +AGP DD F W I GP +PF GG++ ++ FP DYP PP + F + FHPN+ +G++C+ IL E+WSP ++ K+LLS+ S+L +PN + + M++ DR +Y R +K Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 478 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 478 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 478 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 56/150 (37.33%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 32 LRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 481 ++++ SKR++KEL +L SA P +++F W TI GP ++ ++G + +S+ FP YP+ P V F T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ D+ +Y+ ++ +K+ Sbjct: 27 VKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEKH 175
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 55/145 (37.93%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 490 +++ KE+ L DPP P +D+ Q I GP +P+AGG+F + + D+P PPK F TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR T+ +A G Sbjct: 14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQG 158 The following BLAST results are available for this feature:
BLAST of DC900030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900030 ID=DC900030; Name=DC900030; organism=Citrus sinensis; type=EST; length=703bpback to top |