DC900030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 2 Query: 5 RPNSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 427 RP R+S SKR+ +EL+ L +A P D++F W AT+ GP D+ + + +++ FP DYP+KPP V F T +HPN++ +G+ICLDILKE W+ + + +LLS+ SLL +PN PL + A M+ Sbjct: 18 RPRDMTTSKERHS--VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW 156
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 56/145 (38.62%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 490 +R+ KE+ L DPP P +D+ Q I GP +P+AGG+F + + D+P PPK F TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR T +A G Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQG 158
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 62 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 439 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ DR Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 62 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 439 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ DR Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 62 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 439 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ DR Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 51/140 (36.43%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 62 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE-------------QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 439 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL E +W P T+ +++S+ S+L DPN D P + A ++ DR Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24 Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 +++ KE+ L DPP P +D+ Q +I GP +P+AGG+F + + D+P PPK F TK+FHPN++SNG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR T+ +A Sbjct: 14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 14 SQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 427 S P +S KR+ EL L SA P D++F W+ TI G D+ F G + +S+ F DYPFK PKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 25 SAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 490 +R+ KE+ L DPP P +D+ Q I GP +P+A G+F + + D+P PPK F TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + A+ T+ +A G Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTEIHAQG 158
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24 Identity = 51/155 (32.90%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 463 S + + + K+LK++QK+PP S G V D +F W+ I+GP D+ + GG F ++ FP DYP PPK+ F T+++HPN++ NG +C+ IL E+W P + +L+S+ S+L+ PN + P + A ++ + +++ R Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVR 157 The following BLAST results are available for this feature:
BLAST of DC900030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900030 ID=DC900030; Name=DC900030; organism=Citrus sinensis; type=EST; length=703bpback to top |