DC900030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: U2D2L_HUMAN (Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo sapiens GN=UBE2DNL PE=5 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17 Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 47 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFH 271 MA K I+KE +L +DP CSAGPV DDM HWQATI P+DS + GGVF + FP DY FKPPK+ F ++H Sbjct: 1 MALKLIHKEFLELARDPQPHCSAGPVWDDMLHWQATITRPNDSSYLGGVFF--LKFPSDYLFKPPKIKFTNGIYH 73
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17 Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 2 ARPNSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 +R +S R + + + KE+ +L+ + P +C + H+ + P +S + GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ +Y + ++YA Sbjct: 17 SRTSSTTSDSTRRVSVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17 Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 2 ARPNSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 +R S +R + + + KE+ +L+ + P +C + H+ + P +S + GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ +Y + ++YA Sbjct: 17 SRTTSTTLDSMRRISVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17 Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 11 NSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 379 +S AP S++A+ R+ KEL + Q +PP V D++ W ++G + +A + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+ Sbjct: 3 SSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKH-KVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 49/148 (33.11%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 50 ASKRINKELKDLQKD-PPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 487 ASKR+ KEL DL K+ PP ++ W ++ P P+ F + I FP +YP KPP + F TK++HPNI+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + D + A +T +Y + Sbjct: 3 ASKRVAKELDDLSKELPPYLRHLSSDDANVLVWHMLLL-PDQLPYRLKAFGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQDPEMFRKKAEEFTLQYGV 149
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 2 Query: 11 NSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 379 +S AP S++A R+ KEL + Q +PP V D++ W + G + +A + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 3 SSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 47/145 (32.41%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 62 INKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 487 ++++ DL+++ +A PV++DM W+ I G +S + G VF ++IHF +Y + PP V F T FHPN++ + G C+D L E+W+ T+S +LL++ +L++P ++P+ E A + D + Y T R + + M Sbjct: 9 LHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILRLFNRPLQM 153
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 52/168 (30.95%), Postives = 84/168 (50.00%), Query Frame = 2 Query: 5 RPNSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 R ++ A R + K + KE+ +L+ + P +C P + + ++Q T++ P + + GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 18 RASNPASDSTRRVSVRDKLLVKEVAELEANLPCTCKVNFPDPNKLHYFQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17 Identity = 46/156 (29.49%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL------------DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 478 +S R + E+ + P G V D ++F WQ TI+GP ++ + GG F + FP +YP PP V F ++++HPN+ +G +C+ ++ E+W+P T+ ++LSI S+L+ PN + P E A ++ + +++ R +K Sbjct: 10 SSSRSSSEIS--RTTPSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRK 163
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17 Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 11 NSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 379 +S +P S++A R+ KEL + Q +PP V D++ W + G + +A + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 3 SSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125 The following BLAST results are available for this feature:
BLAST of DC900030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900030 ID=DC900030; Name=DC900030; organism=Citrus sinensis; type=EST; length=703bpback to top |