DC900030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.588e-49 Identity = 90/145 (62.07%), Postives = 113/145 (77.93%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 ++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.588e-49 Identity = 90/145 (62.07%), Postives = 113/145 (77.93%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 ++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.588e-49 Identity = 90/145 (62.07%), Postives = 113/145 (77.93%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 ++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.329e-42 Identity = 71/145 (48.97%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 + KRI +E+ +L DPP CSAGP D+++HW ATI+GPS +P+ GG+F + I FP DYPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P IA +Y TDR K++ A+ WT ++A Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39 Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 A KR+ KE+ D+ K PP+ CSA V D++ W+AT+ GP SPF GVF + I P DYPFKPP + F TK++HPNI S+G+IC ++ WSP L I VL +I S+LTDPNPD+PL EIA +KTDR + TA+ WT+KYA Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYA 147
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 2 Query: 110 SAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 S G +++++ W A I GP +P+ GG+F +SI FP DYPFKPPK F+T ++HPNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDPLVPEI ++K +R +++ AR +T ++A Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.704e-35 Identity = 72/145 (49.66%), Postives = 97/145 (66.90%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 490 +RI KE + L +P SA P D+M ++ I+GP+ SP+ GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +K++ A+ TA+ WT+ YA G Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASG 152
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.226e-35 Identity = 69/144 (47.92%), Postives = 98/144 (68.06%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 487 +RI KE + L ++P +A P ++ ++ + GP+DSPF GGVF + + P DYP PKV F TK++HPNI+ G ICLD+LK++WSPAL I +LLSI +LL+ PNPDDPL ++A ++K + A+ AR WTQKYA+ Sbjct: 6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAV 149
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.907e-35 Identity = 67/149 (44.97%), Postives = 98/149 (65.77%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 S +S+R+ KE DL++ P V D++FHW T +GPSDS +AGG F S+ FP DYPF+PP + F T+++HPN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV IA Y+ DR ++ AR + +++A Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.797e-35 Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 487 +RI KE + L +P A P + ++ I GP DSPF GG F + + P +YP PKV F TK++HPN++ +G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ A+ TAR+WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149 The following BLAST results are available for this feature:
BLAST of DC900030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900030 ID=DC900030; Name=DC900030; organism=Citrus sinensis; type=EST; length=703bpback to top |