DC900015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.313e-22 Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 13 SAWVLCMLVTGPL---SAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 336 S VL LV L + AI+CGQVS +L+PCI + R +G P CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 7 SQLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.946e-22 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 4 KLVSAWVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 333 K+++ ++ + + I CG V+ +LA C+ +L + GP+P CC GV+SL A+TTPDR+ C CLK A + I LN + A LP CGVSIPY IS ST+C + Sbjct: 6 KIITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.731e-22 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 22 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 333 V+ V ++ A++CG V+ S+APC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DCSK+ Sbjct: 16 VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.731e-22 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 22 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 333 V+ V ++ A++CG V+ S+APC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DCSK+ Sbjct: 16 VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 8.790e-22 Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 7 LVSAWVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 333 L++ ++ ML P +A AI CG V + PC+ +++ GGP P CC+GV++L+ AR+ DRQ+ACNCLK AR I +LN +NA +P CGV++PY IS + DCS+V Sbjct: 5 LMAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 52/116 (44.83%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 1 LKLVSAWVLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGG---PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPY--KISTSTDCS 327 +KL + ++ GP++A+A ++CG+V+ +L PC G+L +GG P P CCNGVR LN TT DR+ AC C+K AAR++ P LN + AAG+P CG+ IPY +I +T C+ Sbjct: 5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQ-CCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.227e-20 Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 61 AITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 333 AITCGQVS +L PC + + G P CC+GV+ L AR+T D+Q C CLK A + N AAG+P CGVS+PY IS S DCSK+ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 25 LCMLVTGPL---SAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAAR--SIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 336 LC+L+ S AI+C V +L PC+ ++ GG IP CCNG+R L+ A + D+Q C C+K S S+ L AA LPG CGV +PYKI ST+C+ ++ Sbjct: 8 LCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 25 LCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQA--ARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 336 +C+++ A++C V L PC+ ++ GGP+P CCNG+ +L + A+T+ DRQ C C+K A ++ + NA LP CGV +PYK S STDC ++ Sbjct: 8 VCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of DC900015 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.647e-18 Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 22 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGG-PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 333 V+ +L+ +AI C QV+ LA C+ +L++GG P PM CCNG+ SL AAA DRQ ACNCLK A +IP +N + A LP CGV+I S + DC+ + Sbjct: 15 VITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM-CCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118 The following BLAST results are available for this feature:
BLAST of DC900015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900015 ID=DC900015; Name=DC900015; organism=Citrus sinensis; type=EST; length=557bpback to top |