DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20
Identity = 65/182 (35.71%), Postives = 107/182 (58.79%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK---EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEG 640
            +SA   P I HRD+KS+N+LLDE +  +VSDFG +R ++   TH + + ++GT GYV PEYY S + + K DVYS+GVVL+EL+TG++P  +    ++  +  +  H ++ + +    E+M     D     +++   ++A  CL+ +  +RP M +V    ++I A S  DS   I  D+G
Sbjct:  565 HSAASSP-IYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWT-TVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITV--SNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKILA-SQEDSLVNIENDDG 741          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20
Identity = 59/157 (37.58%), Postives = 95/157 (60.51%), Query Frame = 2
Query:  113 RGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADF-GDNNLVGWVKQHAK--LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            R  P +I+RD+K SN+LL E+++ ++SDFG+A++  + D TH+S   + GT GY  P+Y  + + + K D+YS+GVVLLEL+TG++  D+     D NLVGW +   K       + DP L  + P     L Q L +++ C+ ++P  RP +  V+
Sbjct:  221 RMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVM-GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYP--VRGLYQALAISAMCVQEQPTMRPVVSDVV 374          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20
Identity = 54/155 (34.84%), Postives = 92/155 (59.35%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA-----KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR+     T  + S + GT GY+ PEY    + S K DVYS+GV++LE+++G++   ++ FG+++    +  HA       K  D+ DP + +   N E+  ++ +H+   C+ + P +RP +  V  M
Sbjct:  472 IIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRK---NSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEV--VRCIHIGLLCVQEDPAKRPAISTVFMM 621          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARL--MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKR------PTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+K++N+LLDENF  +VSDFG++R+   SA  TH+S + + GT GY+ PEYY+    + K DVYS+GVVLLE+L  +       P + AD     L+ WVK  + +  +  + D +L  +  +  +E  +   +A  C+ DR   RP M  V+
Sbjct:  642 IIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVS-TVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQAD-----LIRWVKSNYRRGTVDQIIDSDLSADITSTSLE--KFCEIAVRCVQDRGMERPPMNDVV 790          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 53/152 (34.87%), Postives = 88/152 (57.89%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT--DSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR+     T  + S + GT GY+ PEY    + S K DVYS+GV++LE+++G++ +  D +D   + L    +        D+ DP +     N E+  ++ +H+   C+ + P +RPT+  V  M
Sbjct:  474 IIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEV--VRCIHIGLLCVQEDPAKRPTISTVFMM 623          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSA--MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD---NNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD+    +++DFG+A+L       TH   S +AGT GY+ PEY    + S K DV+S+GV+++E++TGK   +     D    NL+ WV +   +  I  V DP L     +   E+L+ +H+   C+ + P  RPTM  V  M
Sbjct:  482 IIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTGSRS---EILRCIHIGLLCVQESPASRPTMDSVALM 634          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 586
            P I+HRD+KSSN+LLD+  +A+++DFG++R     D     + +AGT GY+  EYYQ+ R S K DVYS+GVVLLE++T K P    +    ++  WVK    +  IS++ DP+L  +         + L +A  C++    +RP M  V+   KE
Sbjct:  686 PLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNK-PVIDHNRDMPHIAEWVKLMLTRGDISNIMDPKL--QGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKE 838          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 56/149 (37.58%), Postives = 90/149 (60.40%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+K+SN+LLD     +V+DFGMARL +  +T    S + GT GY+ PEY +  + S K DVYS+GV+LLE+++G++   + +F    L  +  K+  + ++  + DP L +   N  I+L+Q   +   C+ +   +RPTM  V+
Sbjct:  461 IIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK---NKNFETEGLPAFAWKRWIEGELESIIDPYLNENPRNEIIKLIQ---IGLLCVQENAAKRPTMNSVI 603          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 62/159 (38.99%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            +I+RD K+SN+LLD  + A++SDFG+A+     D     + + GT GY  PEY  +   +TK DVYS+GVVLLELL+G+R  D +   G+ NLV W K +   K KI  V D  L  +D     E  +   ++  CL      RP M +V++  + IQ+
Sbjct:  199 VIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRL--QDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQS 355          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.756e-20
Identity = 55/158 (34.81%), Postives = 94/158 (59.49%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS--ADFGDNNLVGWVKQHAKLKISDVFDPEL----MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 583
            IIHRD+K+SN+LLD   +A+++DFG+AR      +H+S + +AGT GY+ PEY    + +   DVYS+GV++LE++TGK+ T S  +D+ D+ +    K     ++  ++DP L      +   I+ E+ + + +   C  + P  RP M +++ M K
Sbjct:  446 IIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHIS-TAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLK 602          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
WAKLK_ARATH1.237e-2035.71Putative wall-associated receptor kinase-like 11 O... [more]
RLCK7_ARATH1.237e-2037.58Probable serine/threonine-protein kinase RLCKVII O... [more]
CRK6_ARATH1.237e-2034.84Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
Y5900_ARATH1.616e-2039.49Putative receptor-like protein kinase At5g39000 OS... [more]
CRK8_ARATH1.616e-2034.87Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK28_ARATH1.616e-2037.82Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y1756_ARATH2.110e-2038.46Probable LRR receptor-like serine/threonine-protei... [more]
CRK36_ARATH2.110e-2037.58Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
APK1A_ARATH2.110e-2038.99Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
CRK2_ARATH2.756e-2034.81Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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