DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = 2
Query:  134 HRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT-DSADFGDNNLVGWVKQHAKLKI-SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 604
            H ++KSSN+LL +++EA+VSD+G+A ++S      S S      GY  PE   + + S K DVYS+GV++LELLTGK PT    +    +L  WV+   + +  SDV DPEL +  P     +++ L +  +C    P  RP+M +V  + +E+   SG
Sbjct:  468 HGNIKSSNILLSDSYEAKVSDYGLAPIIS------STSAPNRIDGYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIEEVSHSSG 620          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG------KRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL-MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTI 625
            IIHRD+KS+N+LLD+NF  +V+DFG++RL     TH+S +   GTPGYV P+Y+  ++ S K DVYS+ VVL+EL++        RP    +   N  V  ++ H   ++ D+ DP L    D  +   ++    +A  CL      RP M  V      IQ  +G  S+  +
Sbjct:  464 IIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAP-QGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINL-SNMAVVKIQNH---ELRDMVDPSLGFDTDTRVRQTVIAVAELAFQCLQSDKDLRPCMSHVQDTLTRIQ-NNGFGSEMDV 630          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 57/154 (37.01%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLS--VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            I+HRDMK+SNVLLD+    +++DFGMA+L     T  +   S +AGT GY+ PEY  S   S K DV+S+GV++LE++ GK+   S +   +  L+ +V K   + ++ ++ DP L+ E   +  E+++ +H+   C+ +    RPTM  V+ M
Sbjct:  465 IVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLV-ETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVM 617          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 55/150 (36.67%), Postives = 93/150 (62.00%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGW-VKQHAKLKISDVFDPELMKEDPNIEIELLQHLH-VASACLDDRPWRRPTMIQVM 571
            IIHRD+KS+NVL+D+N  A++ DFG+A   +  D  +  +  AGT GY+ P+Y  + R STK DV+S+G++LLE+++G++  D   +  + +V W +    + KI  ++DP +    P I++ +  HL  VA+ C+     +RP M +V+
Sbjct:  181 IIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAID-VRYSPSFIVDWAIPMIKRGKIGGIYDPRI---GPPIDVSVRNHLGLVAAKCVRTCREKRPGMEEVV 326          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 58/174 (33.33%), Postives = 101/174 (58.05%), Query Frame = 2
Query:  119 IPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI------QAGSGLDSQS 619
            +P ++HRD+K++N+LLD++ +A+++DFG++R     +     + +AGTPGY+ PEYYQ+   + K D+YS+G+VLLE+++  RP         ++V WV     K  +  + DP L  +D +I   + + + +A +C+     RRP M +V+   KE       + G G D +S
Sbjct:  695 VPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIIS-NRPIIQQSREKPHIVEWVSFMITKGDLRSIMDPNL-HQDYDIG-SVWKAIELAMSCVSLSSARRPNMSRVVNELKECLISETSRIGEGRDMES 865          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGW----VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 583
            P IIHRD+K+SN+LLDE FEA+V+DFG+A+      TH+S + +AGT GYV PEY    + + K DVYS+GVVLLELL+ ++   + + G   ++  W    V++   L + +   PE  K  P +   L +++ +A  C   +   RPTM QV+ M +
Sbjct:  406 PSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMS-TRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPE--KGPPEV---LEKYVLIAVLCSHPQLHARPTMDQVVKMLE 558          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20
Identity = 58/160 (36.25%), Postives = 97/160 (60.62%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            +I+RD K++N+LLD +F A++SDFG+A+     D TH+S   + GT GY  PEY  + R + K DVYS+GVVLLEL++G+R  D+++ G+  +LV W   +   K K+  + D +L  + P  +       ++A  CL+     RP M +V+   +++++
Sbjct:  215 VIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVI-GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYP--QKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLES 371          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 61/157 (38.85%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            +I+RD KSSNVLLD+ F  ++SDFG+AR     D     +   GT GY  PEY Q+     K DVYS+GVVL E++TG+R  + +    +  L+ WVK++     + S + DP L    P      L  L  A  CL      RPTM  V+   K+I
Sbjct:  214 VIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKL--ADLCLKKNDKERPTMEIVVERLKKI 368          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 64/177 (36.16%), Postives = 103/177 (58.19%), Query Frame = 2
Query:  107 SARGIPHI-------IHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 610
            +ARG+ ++        H ++KSSN+LL ++ +A+VSDFG+A+L+ +  T+ + +T     GY  PE     R S KGDVYS+GVVLLEL+TGK P++S    +  +L  WVK  A+ +   +VFD EL+    + E  + + + +   C    P +RP M +V+   + ++  SG D
Sbjct:  478 AARGLDYLHSQGTSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRAT-----GYRAPEVTDPKRVSQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLECTSQHPDQRPEMSEVVRKMENLRPYSGSD 649          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 57/166 (34.34%), Postives = 100/166 (60.24%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD--SADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            +SA   P I HRD+K++N+LLDE + A++SDFG +R ++   THL+ + +AGT GY+ PEY+ S + + K DVYS+GVVL+EL+TG++P     ++ G      +++   + +  D+ D  +  E      +++    +A  CL+ +  +RP M +V    + I++
Sbjct:  542 HSAASFP-IFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLT-TLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESK----QVMAVAKLARRCLNRKGNKRPNMREVSIKLERIRS 701          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
Y3288_ARATH3.600e-2037.11Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y1839_ARATH3.600e-2035.84Probable serine/threonine-protein kinase At1g18390... [more]
CRK41_ARATH3.600e-2037.01Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CCR35_ARATH3.600e-2036.67Serine/threonine-protein kinase-like protein At3g5... [more]
Y2899_ARATH4.701e-2033.33Probable leucine-rich repeat receptor-like protein... [more]
RKF3_ARATH4.701e-2040.25Probable LRR receptor-like serine/threonine-protei... [more]
APK2A_ARATH4.701e-2036.25Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y5707_ARATH6.140e-2038.85Probable receptor-like protein kinase At5g47070 OS... [more]
Y1848_ARATH6.140e-2036.16Probable inactive receptor kinase At1g48480 OS=Ara... [more]
WAKLC_ARATH6.140e-2034.34Wall-associated receptor kinase-like 3 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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