DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 60/174 (34.48%), Postives = 105/174 (60.34%), Query Frame = 2
Query:   95 LVPNSARGI--------PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM-DTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 586
            +V  SA+G+        P ++HRD+K++N+LL+E+  A+++DFG++R      +TH+S + +AGTPGY+ PEYY++   + K DVYS+G+VLLE++T +   + +     ++  WV     K  I ++ DP+L  +  +  +   + + +A +CL+    RRPTM QV+    E
Sbjct:  694 IVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVS-TVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSR-EKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSV--WRAVELAMSCLNPSSARRPTMSQVVIELNE 863          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR      T      + GT GY+PPEY    + STK DVYS+GV++LE++ GK+ +      D+  NLV  V +        D+ DP + +   N E+  ++ +H+   C+ + P  RP M  +  M
Sbjct:  460 IIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEV--IRCIHIGILCVQETPADRPEMSTIFQM 610          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 53/157 (33.76%), Postives = 89/157 (56.69%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD--SADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            IIHRD+K+SN+LLD     +++DFG+AR      T  +   + GT GY+PPEY  + + STK DVYS+GV++LE++ GK+ +     D   +NLV  V +      + ++ DP + +     E+  ++ +H+   C+ + P  RP+M  +  M   +
Sbjct:  484 IIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEV--IRCIHIGLLCVQENPDDRPSMSTIFRMLTNV 638          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 2
Query:  134 HRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLKI-SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            H ++KSSN+LL E+FEA+VSD+ +A ++S   T   +       GY  PE   + + S K DVYS+GV++LELLTGK PT      +  +L  WV    + +  SDVFDPEL +   +    +++ L++  +C    P  RPTM +V  + +E+
Sbjct:  466 HGNIKSSNILLSESFEAKVSDYCLAPMISPTSTPNRID------GYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEV 613          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 58/166 (34.94%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT--DSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            +S   IP IIHRD+K+ N+LLDEN  A+V+DFG ++L   MD     + + GT GY+ PEYY ++  + K DVYS+GVVL+EL++G++    +  +   + +  +V    + ++ ++ D +++ E+   EI   +   VA  C   +   RP MI+V A  + ++A
Sbjct:  222 HSGASIP-IIHRDIKTENILLDENLTAKVADFGASKL-KPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIH--EAARVAVECTRLKGEERPRMIEVAAELETLRA 383          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            +IHRD+K SNVL++++   R+ DFG+ARL     +  + + + GT GY+ PE  ++ + S+  DV+++GV+LLE+++G+RPTDS  F    L  WV + HA+ +I    DP L      +E  L   L V   C   RP  RP+M  V+
Sbjct:  486 VIHRDIKPSNVLIEDDMNPRLGDFGLARLYER-GSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTF---FLADWVMELHARGEILHAVDPRLGFGYDGVEARLA--LVVGLLCCHQRPTSRPSMRTVL 628          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 60/174 (34.48%), Postives = 100/174 (57.47%), Query Frame = 2
Query:   95 LVPNSARGIPH--------IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            ++   ARGI +        IIHRD+K+SN+LLD +   ++SDFGMAR+     T  +   + GT GY+ PEY    + S K DVYS+GV++LEL+TGK+ +    + G  +LV +V     +++ L++ D    E M+ +     E+++ +H+A  C+ +    RP+M  ++ M
Sbjct:  449 IIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVD----EAMRGNFQTN-EVIRCIHIALLCVQEDSSERPSMDDILVM 617          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE------IQAGSGLDSQSTIATDEGGFGTVEMVEMSIQE 682
            IIHRD+K+SN+LLD     +V+DFGMARL +   T      + GT GY+ PEY ++   S K DVYS+GVVLLE++TG+   +  +        W K     + + + D  L +   N   E+++ +H+   C+ +   +RPTM  V+           +   +G  + S  A  E   GT+ + E+SI E
Sbjct:  460 IIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFEALGLPAYAW-KCWVAGEAASIIDHVLSRSRSN---EIMRFIHIGLLCVQENVSKRPTMSLVIQWLGSETIAIPLPTVAGFTNASYQAEHEA--GTLSLNELSITE 644          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT--DSADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+ N+LLD +   ++ DFG+AR      T  + + + GT GY+PPEY  + + STK DVYS+GV++LE++ GK+ +  +  D   +NLV +V         L++ D   P     D N   E+++ +H+   C+ + P  RPTM  V  M
Sbjct:  433 IIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWRLWNNEPLLELVDA--PMGENYDRN---EVIRCIHIGLLCVQENPADRPTMSTVFHM 583          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD--SADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+ N+LLD +   +++DFG+AR      T  +   + GT GY+PPEY  + + S K DVYS+GV++LE++ GK+ +     D    NLV +V       + L++ D    E   +D     E+++ +H++  C+ + P  RPTM  V  M
Sbjct:  456 IIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKD-----EVIRCIHISLLCVQENPADRPTMSTVFQM 606          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
RLK6_ARATH8.019e-2034.48Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK31_ARATH8.019e-2036.60Putative cysteine-rich receptor-like protein kinas... [more]
CRK21_ARATH8.019e-2033.76Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y5659_ARATH1.047e-1937.66Probable inactive receptor kinase At5g16590 OS=Ara... [more]
WAKLS_ARATH1.047e-1934.94Putative wall-associated receptor kinase-like 16 O... [more]
LRKA2_ARATH1.047e-1938.26Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK25_ARATH1.047e-1934.48Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK38_ARATH1.368e-1933.51Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK24_ARATH1.368e-1936.54Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK16_ARATH1.368e-1935.26Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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