DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK--RPTDSADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR+     +  +   +AGT GY+PPEY    + S K DVYS+GV++LE++ GK  R    AD    NLV +V       + L++ D+   E  + +     E+++ +H+A  C+ + P  RP +  +M M
Sbjct:  488 IIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTE-----EVIRCIHIALLCVQEDPKDRPNLSTIMMM 638          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 58/156 (37.18%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 583
            I+HRD+K++NVLLD+    ++SDFG+A+L     TH+S + +AGT GY+ PEY      + K DVYS+G+V LE++ G+  ++  +   NN   L+ WV+    K  + ++ DP L  E  N E E +  + +A  C    P  RP+M +V+ M +
Sbjct:  746 IVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHIS-TRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR--SNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSE-YNRE-EAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTL-AGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD--NNLVGWVKQHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            P ++HRD+K++N+LL+E   A+++DFG++R    +D    VST+ AGTPGY+ PEYY++   S K DVYS+GVVLLE++T +   D        N+ VG++    K  I  + DP+LM + D N   ++++   +A AC++    RRPTM  V+
Sbjct:  702 PPMVHRDVKTTNILLNERCGAKLADFGLSRSFP-IDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHINDWVGFML--TKGDIKSIVDPKLMGDYDTNGAWKIVE---LALACVNPSSNRRPTMAHVV 849          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 62/175 (35.43%), Postives = 99/175 (56.57%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL-----KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDE 637
            I HRD+KS+N+LLDE + A+VSDFG +R +S   TH + + ++GT GYV PEYY S   + K DVYS+GVVL+EL+TG++P       +   +  +  + +L     ++ ++ D  + + D  +E +++   ++A  CL      RP M +V    + I   +  D Q  I  DE
Sbjct:  575 IYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWT-TVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPV--ITLSETQEITGLADYFRLAMRENRLFEIIDARI-RNDCKLE-QVIAVANLALRCLKKTGKTRPDMREVSTALERI-CSAPEDFQVQIQIDE 743          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 56/153 (36.60%), Postives = 92/153 (60.13%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG---KRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEI-ELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+K+SN+LLD     +V+DFGMARL    +T    S + GT GY+ PEY    + STK DVYS+GV+LLE+++G   K+     +  +  L  +V K+  + + +++ DP L     NI I E+++ +H+   C+ +   +RP++  ++
Sbjct:  466 IIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDP-LAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSIL 617          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.333e-19
Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQH--AKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +I+RD+K+SN+LLD +F A++SDFG+AR    M     VST + GT GY  PEY  +   + + DVYS+GVVLLELL G++  D +    + NLV W + +  ++ K+  + D  L  +  P   + L     +A  CL   P  RPTM QV+    ++Q
Sbjct:  193 VIYRDIKASNILLDSDFNAKLSDFGLAR-DGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLAS---IAVQCLSFEPKSRPTMDQVVRALVQLQ 348          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.333e-19
Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  119 IPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMF 580
            I  I+HRD+ S N+LLD ++ A++SDFG A+L+    ++ S   +AGT GYV PE+  + + + K DVYS+GV++LEL+ GK P D      ++          L +  + D  +++       +LL+ + +A  CL   P  RPTM+ +   F
Sbjct:  974 ITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSA--VAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSS------PGEALSLRSISDERVLEPRGQNREKLLKMVEMALLCLQANPESRPTMLSISTTF 1119          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQH-AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQST 622
            P I+HRD++SSNVLL ++F A+++DF +    S     L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W     ++ K+    DP+L  + P   +  L    VA+ C+      RP M  V+   + +        +ST
Sbjct:  198 PPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKL--AAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPEST 364          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 59/168 (35.12%), Postives = 99/168 (58.93%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVG--WVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 601
            +SA   P I HRD+KS+N++LDE   A+VSDFG +R ++   THL+ + ++GT GY+ PEY+QS + + K DVYS+GVVL EL+TG++        +   +   +     + ++SD+ D  +   D     ++     +A  CL+ +  +RP+M QV    ++I++ S
Sbjct:  548 HSAASSP-IYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLT-TVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARI--RDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKIRSYS 711          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 48/97 (49.48%), Postives = 71/97 (73.20%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD 394
            +SA  IP I HRD+K++N+LLDE + A+VSDFG +R ++   THL+ + +AGT GY+ PEY+ S + + K DVYS+GVVL+EL+TG++P      G+
Sbjct:  548 HSAASIP-IYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLT-TLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRKRIGN 642          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
CRK12_ARATH1.368e-1936.54Putative cysteine-rich receptor-like protein kinas... [more]
Y1534_ARATH1.787e-1937.18Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH1.787e-1940.26Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH1.787e-1935.43Putative wall-associated receptor kinase-like 13 O... [more]
CRK37_ARATH1.787e-1936.60Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y3545_ARATH2.333e-1938.75Probable receptor-like protein kinase At3g55450 OS... [more]
Y1571_ARATH2.333e-1934.42Probable leucine-rich repeat receptor-like protein... [more]
Y2197_ARATH3.047e-1935.50Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
WAKLJ_ARATH3.047e-1935.12Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLF_ARATH3.047e-1949.48Wall-associated receptor kinase-like 6 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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