DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 58/159 (36.48%), Postives = 93/159 (58.49%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK--RPTDSADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNI--EIELLQHLHVASACLDDRPWRRPTMIQVMAMF 580
            IIHRD+K SN+LLD+N   ++SDFGMAR+    +T  +   + GT GY+ PEY      S K DV+S+GV++LE+++GK  R   + D+ +N+L+ +V    K+   L+I D    + +   P+I    E+L+ + +   C+ +    RP M  V+ MF
Sbjct:  649 IIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDY-ENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMF 806          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.980e-19
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD--SADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR      T  +   + GT GY+PPEY    + STK DVYS+GV++LE++ GK+ +     D    NLV  V +        D+ DP + +   N ++  ++ +H+   C+ + P  RP M  +  M
Sbjct:  450 IIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKV--IRCIHIGLLCVQETPVDRPEMSTIFQM 600          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.980e-19
Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADF-GDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE------IQAGSGLDSQSTIATD 634
            IIHRD+K+SN+LLD +   +++DFGMAR+     T  + S + GT GY+ PEY    + S K DVYS+GV++LE+++GK+ +      G ++LV +     +  +  ++ DP +++     E+  ++ +H+   C+ + P  RPT+  ++ M         +    GL  QS I  D
Sbjct:  458 IIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEV--VRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKD 632          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 61/159 (38.36%), Postives = 91/159 (57.23%), Query Frame = 2
Query:  131 IHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLV----GWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +H D+KSSN+LL E+ E  +SD  +  L + + TH        T GY  PE  ++ R S + DVYS+GVV+LE+LTGK P       D  +V     WV+   + +  ++VFD EL+K   NIE E++Q L +A AC+   P  RP M +V  M ++++
Sbjct:  466 VHGDIKSSNILLTEDLEPCLSDTSLVTLFN-LPTHTP-----RTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEWTAEVFDVELLKFQ-NIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVR 617          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 63/175 (36.00%), Postives = 93/175 (53.14%), Query Frame = 2
Query:  107 SARGI--------PHIIHRDMKSSNVLLDENFEARVSDFGMARLMS-----AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            SARGI        P IIHRD+K SN+LLD     +V+DFG+++L++         H++ + + GTPGYV PEYY S R + K DVYS G+V LE+LTG RP         N+V  V +      +  V D  + +     E  + + + +A  C  D P  RP M++++   + I
Sbjct:  736 SARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVT-TIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHG----RNIVREVNEACDAGMMMSVIDRSMGQYS---EECVKRFMELAIRCCQDNPEARPWMLEIVRELENI 902          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 61/165 (36.97%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  104 NSARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP-TDSADFGDNNLVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            +S+  IP IIHRD+K++N+LLD+N  A+V+DFG +RL+  MD     + + GT GY+ PEYY +   + K DVYS+GVVL+ELL+G++           NLV       K  +  ++ D ++M ED   EI+  +   +A+ C       RP M +V A  + ++
Sbjct:  518 HSSASIP-IIHRDIKTANILLDKNLTAKVADFGASRLIP-MDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQ--EAARIAAECTRLMGEERPRMKEVAAELEALR 678          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 583
            IIHRD+K SN+LL+++F  R++DFG+ARL     TH+S + +AGT GY+ PEY    + + K DVYS+GV+++E++TGKR         + L      +    + +  DP L   D   +IE  + L +   C+     +RP M  V+ M K
Sbjct:  444 IIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHIS-TAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSNVEEAVDPIL--GDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMK 592          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 61/198 (30.81%), Postives = 98/198 (49.49%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD--SADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMF-------------------KEIQAGSGLDSQSTIATDEGGFGTV 655
            IIHRD+K+ N+LLD++   +++DFGMAR+     T      + GT GY+ PEY    + S K DVYS+GV++LE+++G + +     D    NLV +  +  +    S++ DP     D     E+ + +H+A  C+ +    RPTM  ++ M                    K+ QAG  +DS +  + DE     V
Sbjct:  447 IIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSF--GDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPPGFFFRSKQEQAGPSIDSSTHCSVDEASITRV 642          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 53/156 (33.97%), Postives = 90/156 (57.69%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK--RPTDSADFGDNNLVGWV----KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            IIHRD+K+SN+LLD +   +++DFGMAR+     +  +   +AGT GY+PPEY +  + ST+ DVYS+GV++LE++ G+  R    +D    NLV +     +  + L++ D    E  + +     E+ + +H+A  C+   P  RP++  +  M
Sbjct:  457 IIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETE-----EVTRCIHIALLCVQHNPTDRPSLSTINMM 607          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 57/161 (35.40%), Postives = 91/161 (56.52%), Query Frame = 2
Query:  119 IPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGW----VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            IP ++H ++K++ +LLD + E R++DFG+ +L+   D     S      GY PPE  ++   + + DVYS+GVVLLEL++GK+P       + +LV W    V+Q   L+  D    E + ED     E+ + + +   C  D PW+RPTM QV+ + K+I
Sbjct:  638 IPPMVHGEVKAATILLDSSQEPRLADFGLVKLL---DEQFPGSE--SLDGYTPPEQERNASPTLESDVYSFGVVLLELVSGKKP-------EGDLVNWVRGLVRQGQGLRAIDPTMQETVPED-----EIAEAVKIGYLCTADLPWKRPTMQQVVGLLKDI 781          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
SRK6_BRAOE3.047e-1936.48Putative serine/threonine-protein kinase receptor ... [more]
CRK32_ARATH3.980e-1935.95Putative cysteine-rich receptor-like protein kinas... [more]
CRK10_ARATH3.980e-1932.20Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y5516_ARATH5.198e-1938.36Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y5374_ARATH5.198e-1936.00Probable LRR receptor-like serine/threonine-protei... [more]
WAK2_ARATH5.198e-1936.97Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
CRK3_ARATH5.198e-1936.84Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK19_ARATH5.198e-1930.81Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK14_ARATH5.198e-1933.97Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y5815_ARATH6.789e-1935.40Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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