DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.325e-14
Identity = 47/147 (31.97%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  131 IHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            IHRD+K++N+L+D+N  A+V DFG++R++   D + +++ +AGTP +  PE       ++  DVYSYG++L EL TG  P           +  + + A+        P++    PN    L++       CL + P +RPTM Q++
Sbjct: 1497 IHRDIKAANILVDKNNNAKVGDFGLSRVI---DNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPFLE--------IQSIVELARSVCDKKLKPKISSSVPNFISSLIKD------CLHNSPKKRPTMNQII 1626          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.325e-14
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSA-DFGDNNLVGWV--KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFG 649
            P I+H+++KS+N+LLD      +SD G+A  +   +  L+ +      GY  PE   S + S K DVYS+GVV+LELLTG++P DS     + +LV W   + H    +  + DP L    P     L +   V + C+   P  RP M +V+     +   + + S+ T+    G  G
Sbjct:  541 PSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQND----EGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYP--VKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANM-SKRTVGVGSGSSG 712          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.325e-14
Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSA-DFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNI-----EIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            P ++H+++KSSN+LLD     R+SD+G+A        +L V       GY  PE       + K DVYS+GVV+LELLTG++P DS     + +LV W K   +LK  D  D  +   DP +        +     + S C+   P  RP +  V+   K +
Sbjct:  537 PPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQNLGV-------GYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAK--PQLKDMDTLDEMV---DPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALKRL 686          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.325e-14
Identity = 50/177 (28.25%), Postives = 93/177 (52.54%), Query Frame = 2
Query:   95 LVPNSARGIPH--------IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA--------KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 577
            ++   A+GI H        II+RD K+SN+LLD +   ++SDFGMA +    ++  + + +A T  Y+ PEY    + S K DVYS+G+++LE+++GK+ +      +    G +  +A        +LK+ D       + +     E+ + +H+A  C+ + P  RP +  +++M
Sbjct:  455 IIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSN-----EVTRCIHIALLCVQENPEDRPKLSTIVSM 626          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14
Identity = 48/165 (29.09%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  119 IPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPG-YVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ-HAKLKISD----VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            +PH++HR++KS+N+ LD++FE ++SDF +  ++   +T       A T   Y  PE + S + +   DVYS+GVVLLEL+TG+    + +      +  VKQ   K+ ++D    V D +++ +  + + ++ + L +A  C      +RP++++V+ + + I +
Sbjct:  705 VPHLLHRNLKSANIFLDKDFEPKLSDFALDHIVG--ETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQSAEKAEEGSSGESLDIVKQVRRKINLTDGAAQVLDQKILSD--SCQSDMRKTLDIALDCTAVAAEKRPSLVKVIKLLEGISS 865          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14
Identity = 61/169 (36.09%), Postives = 86/169 (50.89%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWV--KQHAKLKISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQV----MAMFKEIQAGSG 604
            P IIHR+ KS+NVLLD++    VSD G+A L+S+         L    GY  PE + S   + + DVYS+GVV+LELLTG+   D     G+  LV W   + H    +  + DP L  + P    + L H   + S C+   P  RP M +V    + M +  + GSG
Sbjct:  607 PPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPE-FDSGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYP---AKSLSHFADIISRCVQSEPEFRPLMSEVVQDLLDMIRRERHGSG 771          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14
Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLA-GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK---RPTDSADFGDNNLVGWVKQ-HAKLKISDVFDPELM-KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+K++N+LLDE + A+VSDFG+++    +D H  VST+  G+ GY+ PEY++  + + K DVYS+GVVL E L  +    PT + +    +L  W    + K  +  + DP L  K  P       +    A  C+ D+   RP+M  V+
Sbjct:  657 IIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLD-HTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKE--QVSLAEWAPYCYKKGMLDQIVDPYLKGKITPEC---FKKFAETAMKCVLDQGIERPSMGDVL 804          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14
Identity = 54/152 (35.53%), Postives = 88/152 (57.89%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLKISD-VFDPELM-KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            IIHRD+K++N+LLDEN  A+V+DFG+++   ++D TH+S + + G+ GY+ PEY++  + + K DVYS+GVVL+E+L  +   +     +  N+  W     K  + D + D  L  K +P     L +    A  CL +    RP+M  V+
Sbjct:  630 IIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTA-VKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNP---ASLKKFGETAEKCLAEYGVDRPSMGDVL 777          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 64/199 (32.16%), Postives = 89/199 (44.72%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL-MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ-----AGSGLDSQSTIATDEGGFGTVEMVEMSIQEAPELSTKP 706
            IIHRD+KS N+LLDE    R+ DFG AR MS         T+ GT G+V PE        T  DV+SYGVVL EL+TG++P    D        WV+  +     D+   EL  K  P    EL+    V   C    P  RP   ++++  K  Q     A +   + +  A       +   ++  I + P +S  P
Sbjct:  136 IIHRDLKSKNILLDEFQRIRLCDFGFAR-MSEQTKKSRHMTMCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRKP--GVDL-------WVR--SPETCFDINPEELKQKSIPGCPSELIS---VCVECCLYEPLTRPKFDEILSQLKVCQNNLKVATAAAAAAAAAAAAAAAVVSTPTIQTPIIQTPNISFSP 319          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: YR831_MIMIV (Putative serine/threonine-protein kinase/receptor R831 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R831 PE=4 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            P I+HRD+K +N+L+DE+F  +++DFG AR+     T     T  GTP +  PE  +  +   K DV+S+GVV+ E+LTGK P    +F              L I +   P +  + P+   +L++       C   +  +RPTM +V+
Sbjct: 1481 PMIVHRDIKPANILVDEHFNVKIADFGFARIKEDNTT----MTRCGTPCWTAPEVIRGEKYCEKADVFSFGVVMWEVLTGKEPFAECNF----------MKVSLDILEGGRPIIPSDCPHEFAKLIK------KCWHAKAHKRPTMTEVV 1610          

HSP 2 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 50/181 (27.62%), Postives = 81/181 (44.75%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTK-----GDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG--LDSQSTIATDEGGFG 649
            I+HRD+KS N+LLD  +  +VSDFG+ ++ S +D   +   + GT  ++ PE       ST+      DVYS+G++L ELLT ++P                  A   I D   P +   D  +    ++++ +   C       RPT +++M     I   S       S+ +   GG G
Sbjct:  904 IVHRDLKSLNLLLDSKWNVKVSDFGLTKVKSELDKKKTNDNIIGTIHWIAPEILND---STEVDYILADVYSFGIILWELLTREQPYKGMT---------PAAIAVSVIRDGMRPPI--SDEAVTAHSIEYIDLIKQCWHSDTIIRPTFLEIMTRLSNILGDSSNMTSGTSSSSLSSGGIG 1070          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
Y1199_DICDI1.325e-1431.97Probable serine/threonine-protein kinase DDB_G0282... [more]
SRF7_ARATH1.325e-1431.84Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
SRF4_ARATH1.325e-1433.33Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
CRK22_ARATH1.325e-1428.25Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
Y5694_ARATH1.730e-1429.09Probably inactive leucine-rich repeat receptor-lik... [more]
SRF3_ARATH1.730e-1436.09Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
FERON_ARATH1.730e-1436.36Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
THE1_ARATH2.260e-1435.53Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
GEFX_DICDI2.952e-1432.16RasGEF domain-containing serine/threonine-protein ... [more]
YR831_MIMIV6.576e-1432.00Putative serine/threonine-protein kinase/receptor ... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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