DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQVMAMFKEI 589
            P  +HRD+KSSN+L+DEN   ++ DFG++ L          S+  GTP Y+ PE       +   DVYS+G+VL E+LT K P     F  +  +   ++   +K           E P I  + L  L  +   C D  P  RP+  ++++    +
Sbjct:  141 PVFVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEP-----FSHHRELEKFREAVCVK----------HERPPIPNDCLDSLRRLIEKCWDKEPISRPSFKEIISALDHV 282          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT 358
            P IIHRD+K+ N+L+D++++ +V+DFG+A + S    H    T+ GT G+V PE       + K DVYSY +VL ELLT
Sbjct:  968 PIIIHRDLKTDNLLVDDSWQVKVADFGLATVKS----HTFAKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLT 1042          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.608e-12
Identity = 48/159 (30.19%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF--RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN--LVGWVKQHAKLKISD---VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 583
            I+H D+K  N+LLD+NF  +V+DFG+A+L    ++ LS+    GT GY+ PE         S K DVYSYG+++L+++  +   ++     +      W+  +  L+  D   +   E+ +ED  I  +++    V+  C+   P  RP M +V+ M +
Sbjct:  615 IVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGARNKVETTTCNGSTAYFPDWI--YKDLENGDQTWIIGDEINEEDNKIVKKMIL---VSLWCIRPCPSDRPPMNKVVEMIE 768          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.608e-12
Identity = 59/193 (30.57%), Postives = 86/193 (44.56%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVS-------TLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK---------------------------LKI-SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 595
            P +IH D+KSSNVLLDE    ++ DFG+AR      +  S S       T+ GT  Y+P EY ++ R +   D +S+GVV+LE L G+R   +       L   V++ A+                           ++I     DP      P + + L Q   +A  CL  R  RRP M QV    +++QA
Sbjct:  334 PSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQ---LACCCLHRRAKRRPPMTQVYERLEKLQA 523          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 59/186 (31.72%), Postives = 89/186 (47.85%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYY-QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ--HAKLKISDVFDPELMK-----EDPNIEIELLQHLHVASACLDDRPW-RRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVE 658
            + HRD+K  N+LLD+N   +VSDFG++ L         + T  GTP YV PE   +     TK D++S GVVL  LL G  P     F D+NL+   ++   A  K    F PE+ +      DPN E        +  A + +  W R+   ++   M K ++  + +++  T  T+E G G  E
Sbjct:  130 VYHRDIKPENLLLDDNENLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYDGTKADIWSCGVVLFVLLAGYLP-----FHDSNLMEMYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPE------TRITIARIRESSWFRKGLHMKQKKMEKRVKEINSVEA-GTAGTNENGAGPSE 303          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CIPK4_ORYSJ (CBL-interacting protein kinase 4 OS=Oryza sativa subsp. japonica GN=CIPK4 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 50/144 (34.72%), Postives = 67/144 (46.53%), Query Frame = 2
Query:  110 ARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGD---------NNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLH 511
            ARG+ H   RD+K  NVLLD +   +VSDFG+A L   +     + T  GTP Y  PE  +       K D +S GV+L  LL G  P D ++  D           L  WV Q A+  +S + DP     D  + +E L   H
Sbjct:  144 ARGVAH---RDVKPQNVLLDGDGNLKVSDFGLAALPDTLRDDGRLHTACGTPAYAAPEVLRRRAYDGAKADAWSCGVILFVLLAGHLPFDDSNIADMCRKAHRREYELPRWVSQPARRLVSRLLDP---NPDTRVAVESLAAHH 281          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: ANKK1_HUMAN (Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 46/153 (30.07%), Postives = 75/153 (49.02%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLM--SAMDTHLSVSTLAGTPGYVPPEYY--QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQV 568
            P ++H D+K  N+LLD N   ++SDFG+++ M  S    ++  S L G   Y+PPE +   +     K DVYS+ +V+ ELLT K+P      G N ++  ++  A ++      P L         E  Q + +   C D  P +RP  + +
Sbjct:  139 PPLLHLDLKPGNILLDSNMHVKISDFGLSKWMEQSTRMQYIERSALRGMLSYIPPEMFLESNKAPGPKYDVYSFAIVIWELLTQKKPYS----GFNMMMIIIRVAAGMR------PSLQPVSDQWPSEAQQMVDLMKRCWDQDPKKRPCFLDI 281          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y9844_DICDI (Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum GN=DDB_G0282963 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLEL----LTGK--RPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            P ++HRD+KS N+L++  F+ +V+DFG+A+         S ST+ GT  Y  PE Y     S K DVYS G+VL E+    +TGK  RP     + DN  + +  Q   +       P +    PN+  +L    ++   C +  P  RP+  Q++
Sbjct: 1591 PALVHRDIKSQNLLINSQFDLKVADFGLAKPTELQTG--SNSTIKGTMAYCAPELYNGISYSEKADVYSLGIVLWEITTRVITGKYQRP-----YEDNTEISFDFQIVIMSSKQGIRPTM---PPNVPPKL---SYLIQKCWNQDPNERPSCQQIL 1733          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: PLK4_NEMVE (Serine/threonine-protein kinase PLK4 OS=Nematostella vectensis GN=v1g246408 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 53/181 (29.28%), Postives = 87/181 (48.07%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD--NNLV---GWVKQHAKLKISDVFDPELMKEDPNIEIEL---LQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGF 646
            IIHRD+   N+LL  + +A+++DFG+A  +S  D      T+ GTP Y+ PE         + DV+S G +L  LL GK P D+       N +V     +  H  ++  D+   +L+K++P   + L   L H  + +  L+ + +  PT   +     E    SG  + +TI+T    F
Sbjct:  133 IIHRDLSLGNILLSSDMDAKIADFGLATRLSLPDE--KHYTMCGTPNYISPEIATRDPHGLESDVWSIGCMLFTLLVGKPPFDTEAVRSTLNKVVLAEYDIPNHVSIEARDLIS-KLLKKNPQDRLTLSGILDHPFITNQTLNTK-YSSPTRQHLNPRAYENSLDSGTGTMATISTGHAPF 309          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: NEK3_HUMAN (Serine/threonine-protein kinase Nek3 OS=Homo sapiens GN=NEK3 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP 370
            ++HRD+KS N+ L +N + ++ DFG ARL+S  +      T  GTP YVPPE +++   + K D++S G +L EL T K P
Sbjct:  123 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLS--NPMAFACTYVGTPYYVPPEIWENLPYNNKSDIWSLGCILYELCTLKHP 201          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
SHKC_DICDI2.763e-1229.94Dual specificity protein kinase shkC OS=Dictyostel... [more]
DRKD_DICDI2.763e-1245.57Probable serine/threonine-protein kinase drkD OS=D... [more]
Y5392_ARATH3.608e-1230.19Probable receptor-like protein kinase At5g39020 OS... [more]
IRAK1_HUMAN3.608e-1230.57Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
CIPKA_ARATH4.712e-1231.72CBL-interacting serine/threonine-protein kinase 10... [more]
CIPK4_ORYSJ4.712e-1234.72CBL-interacting protein kinase 4 OS=Oryza sativa s... [more]
ANKK1_HUMAN4.712e-1230.07Ankyrin repeat and protein kinase domain-containin... [more]
Y9844_DICDI8.038e-1232.05Probable serine/threonine-protein kinase DDB_G0282... [more]
PLK4_NEMVE8.038e-1229.28Serine/threonine-protein kinase PLK4 OS=Nematostel... [more]
NEK3_HUMAN8.038e-1241.98Serine/threonine-protein kinase Nek3 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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