DC900011

Overview
NameDC900011
Unique NameDC900011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11
Identity = 51/170 (30.00%), Postives = 77/170 (45.29%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFE-------------ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 592
            P I+HRD+ S N+LLD N +              ++SDFG++RL     + ++ S   G   Y+ PE ++    S K DVYSYG+VL ELLT   P                + A L   + + P +     +   E+L      + C D  P  RPT  Q++   KE++
Sbjct: 2237 PPILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRLKMEQASQMTQSV--GCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEPQQDMK---------PMKMAHLAAYESYRPPIPLTTSSKWKEIL------TQCWDSNPDSRPTFKQIIVHLKEME 2389          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 589
            +IHRD+KS N+LLDE+   ++ DFG+++L S   T ++ S   G+P ++ PE       + K DVY++G++L EL TG+ P    D              +L ++ V    L    PN     L HL    AC    P +RP+  +++ +  EI
Sbjct:  780 VIHRDIKSLNLLLDEHMNVKICDFGLSKLKS-KSTEMTKS--IGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLD------------SVQLALA-VTTKSLRPPIPNAWPYQLSHL--IQACWHQDPLKRPSFTEILNLLNEI 915          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  122 PHIIHRDMKSSNVLLDENFEARVSDFGMA--RLMSAMDTHLSVST-LAGTPGYVPPEYY---QSFRCSTKGDVYSYGVVLLELLTGKRP 370
            P ++H D+K+ N+LLD  F  +++DFG++  R+MS   +  S S    GT  Y+PPE Y   Q  R S K D+YSY +++ E+L+ K+P
Sbjct:  140 PPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIVYMPPENYEPGQKARASVKHDIYSYAIIIWEVLSRKQP 228          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: NEK9_HUMAN (Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 46/148 (31.08%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 571
            I+HRD+K+ N+ L +    ++ D+G+A+ +++   +    TL GTP Y+ PE  Q  + + K D+++ G V+ ELLT KR  D+     N L   VK    ++  +V       +     +EL+Q +H   +CLD  P +RPT  +++
Sbjct:  172 ILHRDIKTLNIFLTKANLIKLGDYGLAKKLNS--EYSMAETLVGTPYYMSPELCQGVKYNFKSDIWAVGCVIFELLTLKRTFDAT----NPLNLCVKIVQGIRAMEV-------DSSQYSLELIQMVH---SCLDQDPEQRPTADELL 303          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 49/176 (27.84%), Postives = 86/176 (48.86%), Query Frame = 2
Query:  134 HRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL----MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQ--STIATDEGG 643
            H  +KSSNVLL + FE  ++D+G+  L++     + ++       Y  PEY Q  R + K DV+  G+++LE+LTGK P + +   + +L  WV          V+ P L    M +  + E ++L+ L +   C +    +R  + Q +   +E++   G D    ST  ++  G
Sbjct:  483 HGHLKSSNVLLTKTFEPLLTDYGLIPLINQEKAQMHMAA------YRSPEYLQHRRITKKTDVWGLGILILEILTGKFPANFSQSSEEDLASWVNS----GFHGVWAPSLFDKGMGKTSHCEGQILKLLTIGLNCCEPDVEKRLDIGQAVEKIEELKEREGDDDDFYSTYVSETDG 648          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: PKNA2_BIFLO (Probable serine/threonine-protein kinase pknA2 OS=Bifidobacterium longum GN=pknA2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS 379
            ++HRD+K  N+L+++    +++DFG+A+  S   T  S   L GT  Y+ PE  ++ + + +GD+YS G++  E+LTGK P DS
Sbjct:  136 VVHRDIKPENILINDRGHVQITDFGLAKAASQA-TLSSTGMLLGTAAYLAPEMIENNQATAQGDLYSVGIMAWEMLTGKVPFDS 218          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  110 ARGIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPE-YYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ--HAKLKISDVFDPELMK-----EDPNIEIEL 496
            ARG+    HRD+K  N+LLDEN + +VSDFG++ +   +     + TL GTP YV PE   +     +K D++S GVVL  L  G  P     F D N++G  ++   A+ K+ D    +L K      +PN E+ +
Sbjct:  143 ARGV---FHRDLKPENLLLDENRDLKVSDFGLSAMKEQIHPDGMLHTLCGTPAYVAPELLLKKGYDGSKADIWSCGVVLFLLNAGYLP-----FRDPNIMGLYRKIHKAQYKLPDWTSSDLRKLLRRLLEPNPELRI 271          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYY-QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK--LKISDVFDPELMK 469
            + HRD+K  N+LLDEN + ++SDFG++ L  +      + T  GTP YV PE   +      K DV+S GVVL  LL G  P     F + NLV   ++  K   K  + F PE+ K
Sbjct:  130 VYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLP-----FHEQNLVEMYRKITKGEFKCPNWFPPEVKK 241          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD 376
            IIHRD+KS N+L D N+EA+++DFG+A +    D  +  +  AGT GY+ P Y      S K DVYSYGVVLLE+++ ++  D
Sbjct:  149 IIHRDIKSENILFDSNWEAKLADFGLA-VDFGGDKKIRPAP-AGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAID 229          
BLAST of DC900011 vs. ExPASy Swiss-Prot
Match: RCKA_DICDI (RGS domain-containing serine/threonine-protein kinase A OS=Dictyostelium discoideum GN=rckA PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 49/168 (29.17%), Postives = 84/168 (50.00%), Query Frame = 2
Query:  128 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIAT 631
            IIHRD+KS N+LL +  + ++ DFG +R+ +      +++T  GT  ++ PE + S   + K DVYSY ++L E+ T K   D  +  + N+   V +  +        PEL K D    I      ++   C   +P  RP+ I+++A  + I   S  +S   +A+
Sbjct:  959 IIHRDLKSMNILLTKRLKIKIVDFGTSRVAN----KYNMTTHVGTQAWMAPEIFTSRTYTNKVDVYSYAIILFEIFTRKSAYD--ENANINIPNMVMKGER--------PELPK-DMQTSIS-----NIIKKCWQQKPSNRPSFIKIVAYLESIIYPSVSNSLGLVAS 1106          
The following BLAST results are available for this feature:
BLAST of DC900011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
PYK1_DICDI1.050e-1130.00Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
Y9955_DICDI1.371e-1131.82Probable serine/threonine-protein kinase DDB_G0267... [more]
RIPK2_BOVIN1.371e-1140.45Receptor-interacting serine/threonine-protein kina... [more]
NEK9_HUMAN1.371e-1131.08Serine/threonine-protein kinase Nek9 OS=Homo sapie... [more]
RLK_ARATH2.339e-1127.84Probable LRR receptor-like serine/threonine-protei... [more]
PKNA2_BIFLO2.339e-1138.10Probable serine/threonine-protein kinase pknA2 OS=... [more]
CIPKM_ARATH2.339e-1135.77CBL-interacting serine/threonine-protein kinase 22... [more]
CIPKK_ARATH2.339e-1138.46CBL-interacting serine/threonine-protein kinase 20... [more]
STPKL_ARATH3.054e-1146.99Serine/threonine-protein kinase-like protein At5g2... [more]
RCKA_DICDI3.054e-1129.17RGS domain-containing serine/threonine-protein kin... [more]

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Properties
Property NameValue
Genbank descriptionDC900011 VSS Citrus sinensis cDNA clone VS27Q22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900011 ID=DC900011; Name=DC900011; organism=Citrus sinensis; type=EST; length=850bp
GTTTTTTTTTTTTTTTTTTTAGAGAAAATAGAAATTTTTATATATTAAAA
GGGAAAGGAAGAAACAGACTAGAAAAAAAAAAACTCGAGACTAGCTCGTG
CCGAATTCGGCACGAGGCATCCCACACATTATCCACCGGGATATGAAATC
GAGCAATGTTCTGCTAGACGAAAACTTTGAGGCCAGAGTCTCAGATTTTG
GAATGGCAAGACTAATGAGTGCGATGGATACACATTTGAGTGTCAGTACG
CTAGCAGGCACACCCGGCTATGTCCCTCCCGAATACTATCAAAGCTTTAG
ATGTTCGACGAAAGGCGATGTTTACAGTTATGGTGTAGTTTTGCTCGAGT
TGCTAACGGGAAAAAGGCCAACAGATTCAGCAGATTTCGGTGACAATAAC
CTAGTTGGGTGGGTAAAGCAGCATGCGAAGCTGAAAATAAGCGATGTCTT
TGATCCAGAACTCATGAAAGAGGATCCAAACATCGAGATTGAGCTTCTTC
AACACTTGCATGTAGCGAGTGCTTGCCTGGATGATCGACCATGGAGGAGA
CCGACAATGATTCAGGTTATGGCAATGTTTAAAGAAATCCAAGCCGGTTC
AGGACTTGACTCGCAATCTACTATTGCCACTGATGAAGGAGGTTTCGGTA
CAGTCGAAATGGTAGAGATGAGCATCCAAGAAGCTCCAGAACTAAGCACC
AAGCCTTAGNCCATTCAATTTTCAGGACAAGCATTCTTTCAGTGCCCCAA
AATTTTCCCACTTGAAAACCAAAAAAGTTGCCTTTGGTATCTCTACCATT
TAGTGTATGTAATCTTTGTATCCCTTTTGAAAATTCTTGTTATTTATACA
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